BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0646 (670 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 208 5e-56 AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 208 5e-56 AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 208 5e-56 X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 200 1e-53 AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 35 8e-04 AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.1 AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.6 D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.5 M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 21 8.0 >EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-alpha protein. Length = 172 Score = 208 bits (507), Expect = 5e-56 Identities = 100/139 (71%), Positives = 109/139 (78%) Frame = +2 Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433 +LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE Sbjct: 3 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 62 Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLD 613 HALLAFTLGVKQLIVGVNKMDSTEP + +++ +++ P Sbjct: 63 HALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 122 Query: 614 GTGDNMLEPSTKMPWFKGW 670 GDNMLE S+KMPWFKGW Sbjct: 123 WHGDNMLEVSSKMPWFKGW 141 >AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-alpha protein. Length = 274 Score = 208 bits (507), Expect = 5e-56 Identities = 100/139 (71%), Positives = 109/139 (78%) Frame = +2 Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433 +LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE Sbjct: 19 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 78 Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLD 613 HALLAFTLGVKQLIVGVNKMDSTEP + +++ +++ P Sbjct: 79 HALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 138 Query: 614 GTGDNMLEPSTKMPWFKGW 670 GDNMLE S+KMPWFKGW Sbjct: 139 WHGDNMLEVSSKMPWFKGW 157 Score = 41.1 bits (92), Expect = 9e-06 Identities = 18/18 (100%), Positives = 18/18 (100%) Frame = +3 Query: 201 WVLDKLKAERERGITIDI 254 WVLDKLKAERERGITIDI Sbjct: 1 WVLDKLKAERERGITIDI 18 >AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha F2 protein. Length = 461 Score = 208 bits (507), Expect = 5e-56 Identities = 100/139 (71%), Positives = 109/139 (78%) Frame = +2 Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433 +LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE Sbjct: 76 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 135 Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLD 613 HALLAFTLGVKQLIVGVNKMDSTEP + +++ +++ P Sbjct: 136 HALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 195 Query: 614 GTGDNMLEPSTKMPWFKGW 670 GDNMLE S+KMPWFKGW Sbjct: 196 WHGDNMLEVSSKMPWFKGW 214 Score = 159 bits (386), Expect = 2e-41 Identities = 74/75 (98%), Positives = 74/75 (98%) Frame = +3 Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 209 MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 210 DKLKAERERGITIDI 254 DKLKAERERGITIDI Sbjct: 61 DKLKAERERGITIDI 75 >X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha protein. Length = 461 Score = 200 bits (487), Expect = 1e-53 Identities = 95/139 (68%), Positives = 106/139 (76%) Frame = +2 Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433 +LWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNGQTRE Sbjct: 76 ALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTRE 135 Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLD 613 HALLAFTLGVKQLIVGVNKMD T+P + +++ +++ P Sbjct: 136 HALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVPISG 195 Query: 614 GTGDNMLEPSTKMPWFKGW 670 GDNMLEPS K PW+KGW Sbjct: 196 WHGDNMLEPSPKTPWYKGW 214 Score = 159 bits (386), Expect = 2e-41 Identities = 74/75 (98%), Positives = 74/75 (98%) Frame = +3 Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 209 MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 210 DKLKAERERGITIDI 254 DKLKAERERGITIDI Sbjct: 61 DKLKAERERGITIDI 75 >AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation factor 2 protein. Length = 690 Score = 34.7 bits (76), Expect = 8e-04 Identities = 26/70 (37%), Positives = 33/70 (47%) Frame = +2 Query: 287 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 466 VT +D PGH FI G D VL+VAA G E QT + +A V Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246 Query: 467 QLIVGVNKMD 496 +IV +NK+D Sbjct: 247 PIIVAINKID 256 Score = 25.4 bits (53), Expect = 0.49 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +3 Query: 42 KTHINIVVIGHVDSGKST 95 K H + ++GHVD GK+T Sbjct: 143 KRHPIVTIMGHVDHGKTT 160 >AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methyltransferase protein. Length = 683 Score = 24.2 bits (50), Expect = 1.1 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = +3 Query: 51 INIVVIGHVDSGKST 95 INI IGHV GKST Sbjct: 43 INIGTIGHVAHGKST 57 >AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase protein. Length = 567 Score = 23.0 bits (47), Expect = 2.6 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +2 Query: 272 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 373 T KYY D P + FIKN+ ++ +D LI Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327 >D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. Length = 567 Score = 22.6 bits (46), Expect = 3.5 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +2 Query: 272 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 373 T KYY D P + FIKN+ ++ +D L+ Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327 >M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-containing gene,partial cds, clone H40. ). Length = 74 Score = 21.4 bits (43), Expect = 8.0 Identities = 8/26 (30%), Positives = 13/26 (50%) Frame = +2 Query: 188 LQICLGIGQTKG*A*AWYHNRYSLWK 265 L + L + T+ W+ NR + WK Sbjct: 39 LNLALSLSLTETQVKIWFQNRRTKWK 64 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 198,355 Number of Sequences: 438 Number of extensions: 4329 Number of successful extensions: 29 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 21 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 20221290 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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