Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0646
(670 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 208 5e-56
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 208 5e-56
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 208 5e-56
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 200 1e-53
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 35 8e-04
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.1
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.6
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.5
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 21 8.0
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 208 bits (507), Expect = 5e-56
Identities = 100/139 (71%), Positives = 109/139 (78%)
Frame = +2
Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
+LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE
Sbjct: 3 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 62
Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLD 613
HALLAFTLGVKQLIVGVNKMDSTEP + +++ +++ P
Sbjct: 63 HALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 122
Query: 614 GTGDNMLEPSTKMPWFKGW 670
GDNMLE S+KMPWFKGW
Sbjct: 123 WHGDNMLEVSSKMPWFKGW 141
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 208 bits (507), Expect = 5e-56
Identities = 100/139 (71%), Positives = 109/139 (78%)
Frame = +2
Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
+LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE
Sbjct: 19 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 78
Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLD 613
HALLAFTLGVKQLIVGVNKMDSTEP + +++ +++ P
Sbjct: 79 HALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 138
Query: 614 GTGDNMLEPSTKMPWFKGW 670
GDNMLE S+KMPWFKGW
Sbjct: 139 WHGDNMLEVSSKMPWFKGW 157
Score = 41.1 bits (92), Expect = 9e-06
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +3
Query: 201 WVLDKLKAERERGITIDI 254
WVLDKLKAERERGITIDI
Sbjct: 1 WVLDKLKAERERGITIDI 18
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 208 bits (507), Expect = 5e-56
Identities = 100/139 (71%), Positives = 109/139 (78%)
Frame = +2
Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
+LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE
Sbjct: 76 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 135
Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLD 613
HALLAFTLGVKQLIVGVNKMDSTEP + +++ +++ P
Sbjct: 136 HALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 195
Query: 614 GTGDNMLEPSTKMPWFKGW 670
GDNMLE S+KMPWFKGW
Sbjct: 196 WHGDNMLEVSSKMPWFKGW 214
Score = 159 bits (386), Expect = 2e-41
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = +3
Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 209
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 210 DKLKAERERGITIDI 254
DKLKAERERGITIDI
Sbjct: 61 DKLKAERERGITIDI 75
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 200 bits (487), Expect = 1e-53
Identities = 95/139 (68%), Positives = 106/139 (76%)
Frame = +2
Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
+LWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNGQTRE
Sbjct: 76 ALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTRE 135
Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLD 613
HALLAFTLGVKQLIVGVNKMD T+P + +++ +++ P
Sbjct: 136 HALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVPISG 195
Query: 614 GTGDNMLEPSTKMPWFKGW 670
GDNMLEPS K PW+KGW
Sbjct: 196 WHGDNMLEPSPKTPWYKGW 214
Score = 159 bits (386), Expect = 2e-41
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = +3
Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 209
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 210 DKLKAERERGITIDI 254
DKLKAERERGITIDI
Sbjct: 61 DKLKAERERGITIDI 75
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 34.7 bits (76), Expect = 8e-04
Identities = 26/70 (37%), Positives = 33/70 (47%)
Frame = +2
Query: 287 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 466
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 467 QLIVGVNKMD 496
+IV +NK+D
Sbjct: 247 PIIVAINKID 256
Score = 25.4 bits (53), Expect = 0.49
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 42 KTHINIVVIGHVDSGKST 95
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 51 INIVVIGHVDSGKST 95
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 272 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 373
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 272 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 373
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +2
Query: 188 LQICLGIGQTKG*A*AWYHNRYSLWK 265
L + L + T+ W+ NR + WK
Sbjct: 39 LNLALSLSLTETQVKIWFQNRRTKWK 64
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,355
Number of Sequences: 438
Number of extensions: 4329
Number of successful extensions: 29
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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