Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0646
(670 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 163 9e-41
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 163 9e-41
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 163 9e-41
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 163 9e-41
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 100 2e-21
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 91 5e-19
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 66 2e-11
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 66 3e-11
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 38 0.005
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 38 0.005
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 38 0.006
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 38 0.008
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 36 0.032
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 35 0.043
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 34 0.074
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 33 0.13
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 33 0.13
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.23
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.23
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 33 0.23
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 33 0.23
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 31 0.92
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.2
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 1.2
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.6
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.6
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.1
At3g08870.1 68416.m01031 lectin protein kinase, putative similar... 29 3.7
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 4.9
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 4.9
At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 27 8.5
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 163 bits (396), Expect = 9e-41
Identities = 80/138 (57%), Positives = 97/138 (70%)
Frame = +2
Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
+LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTRE
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 135
Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLD 613
HALLAFTLGVKQ+I NKMD+T P + ++ +++ P
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISG 195
Query: 614 GTGDNMLEPSTKMPWFKG 667
GDNM+E ST + W+KG
Sbjct: 196 FEGDNMIERSTNLDWYKG 213
Score = 143 bits (347), Expect = 8e-35
Identities = 68/75 (90%), Positives = 69/75 (92%)
Frame = +3
Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 209
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 210 DKLKAERERGITIDI 254
DKLKAERERGITIDI
Sbjct: 61 DKLKAERERGITIDI 75
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 163 bits (396), Expect = 9e-41
Identities = 80/138 (57%), Positives = 97/138 (70%)
Frame = +2
Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
+LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTRE
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 135
Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLD 613
HALLAFTLGVKQ+I NKMD+T P + ++ +++ P
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISG 195
Query: 614 GTGDNMLEPSTKMPWFKG 667
GDNM+E ST + W+KG
Sbjct: 196 FEGDNMIERSTNLDWYKG 213
Score = 143 bits (347), Expect = 8e-35
Identities = 68/75 (90%), Positives = 69/75 (92%)
Frame = +3
Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 209
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 210 DKLKAERERGITIDI 254
DKLKAERERGITIDI
Sbjct: 61 DKLKAERERGITIDI 75
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 163 bits (396), Expect = 9e-41
Identities = 80/138 (57%), Positives = 97/138 (70%)
Frame = +2
Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
+LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTRE
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 135
Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLD 613
HALLAFTLGVKQ+I NKMD+T P + ++ +++ P
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISG 195
Query: 614 GTGDNMLEPSTKMPWFKG 667
GDNM+E ST + W+KG
Sbjct: 196 FEGDNMIERSTNLDWYKG 213
Score = 143 bits (347), Expect = 8e-35
Identities = 68/75 (90%), Positives = 69/75 (92%)
Frame = +3
Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 209
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 210 DKLKAERERGITIDI 254
DKLKAERERGITIDI
Sbjct: 61 DKLKAERERGITIDI 75
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 163 bits (396), Expect = 9e-41
Identities = 80/138 (57%), Positives = 97/138 (70%)
Frame = +2
Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
+LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTRE
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 135
Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLD 613
HALLAFTLGVKQ+I NKMD+T P + ++ +++ P
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISG 195
Query: 614 GTGDNMLEPSTKMPWFKG 667
GDNM+E ST + W+KG
Sbjct: 196 FEGDNMIERSTNLDWYKG 213
Score = 143 bits (347), Expect = 8e-35
Identities = 68/75 (90%), Positives = 69/75 (92%)
Frame = +3
Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 209
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 210 DKLKAERERGITIDI 254
DKLKAERERGITIDI
Sbjct: 61 DKLKAERERGITIDI 75
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 99.5 bits (237), Expect = 2e-21
Identities = 46/77 (59%), Positives = 56/77 (72%)
Frame = +2
Query: 266 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 445
FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + GQTREH L
Sbjct: 174 FETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQL 233
Query: 446 AFTLGVKQLIVGVNKMD 496
A TLGV +LIV VNKMD
Sbjct: 234 AKTLGVSKLIVVVNKMD 250
Score = 74.1 bits (174), Expect = 8e-14
Identities = 30/72 (41%), Positives = 52/72 (72%)
Frame = +3
Query: 39 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 218
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 219 KAERERGITIDI 254
+ ER +G T+++
Sbjct: 158 EEERLKGKTVEV 169
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 91.5 bits (217), Expect = 5e-19
Identities = 39/78 (50%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Frame = +2
Query: 266 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK-NGQTREHAL 442
F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG GQTREHA
Sbjct: 312 FNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQTREHAR 371
Query: 443 LAFTLGVKQLIVGVNKMD 496
+ GV+Q+IV +NKMD
Sbjct: 372 VLRGFGVEQVIVAINKMD 389
Score = 86.6 bits (205), Expect = 1e-17
Identities = 36/70 (51%), Positives = 52/70 (74%)
Frame = +3
Query: 45 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 224
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 225 ERERGITIDI 254
ERERGIT+ +
Sbjct: 298 ERERGITMTV 307
Score = 34.3 bits (75), Expect = 0.074
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +1
Query: 511 YSEPRFEEIKKEVSSYIKKIGYNPTAVAFVPISGWHRRQHVGAFNQNAL 657
YS+ RF+ IK+ V S+++ + +++ ++P+S + V A + N L
Sbjct: 393 YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLVAAPSDNRL 441
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +2
Query: 263 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 442
++ET + +D PGH D++KNMITG +Q D A+L+V+ G QT+EH L
Sbjct: 136 EYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHIL 188
Query: 443 LAFTLGVKQLIVGVNKMDSTE 505
LA +GV ++V +NK D +
Sbjct: 189 LAKQVGVPDMVVFLNKEDQVD 209
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 27 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 161
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 65.7 bits (153), Expect = 3e-11
Identities = 32/78 (41%), Positives = 48/78 (61%)
Frame = +2
Query: 263 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 442
++ET+K + +D PGH D++KNMITG +Q D +L+V+ G QT+EH L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHIL 176
Query: 443 LAFTLGVKQLIVGVNKMD 496
LA +GV L+ +NK+D
Sbjct: 177 LARQVGVPSLVCFLNKVD 194
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/71 (33%), Positives = 32/71 (45%)
Frame = +3
Query: 36 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 215
+ K H+N+ IGHVD GK+T T + K E GK +DK
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLTAAI---------------TKVLAEEGKAKAIAFDEIDK 107
Query: 216 LKAERERGITI 248
E++RGITI
Sbjct: 108 APEEKKRGITI 118
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +2
Query: 272 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 451
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 452 TLGVKQLIVGVNKMD 496
+ +K +I+ NK+D
Sbjct: 178 MMRLKHIIILQNKID 192
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +2
Query: 272 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 451
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 452 TLGVKQLIVGVNKMD 496
+ +K +I+ NK+D
Sbjct: 178 MMRLKHIIILQNKID 192
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 37.9 bits (84), Expect = 0.006
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +2
Query: 266 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
FE SK +V+ +D PGH + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 434 HALLAFTLGVKQLIVGVNKMD 496
H + +K +I+ NK+D
Sbjct: 166 HLAAVEIMQLKHIIILQNKID 186
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +2
Query: 284 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 463
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 464 KQLIVGVNKMD 496
K +I+ NK+D
Sbjct: 174 KDIIIIQNKID 184
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 35.5 bits (78), Expect = 0.032
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +2
Query: 269 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 448
E S Y + +ID PGH DF + S A+L+V A G QT + LA
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG-------VQAQTVANFYLA 183
Query: 449 FTLGVKQLIVGVNKMD--STEPHTVSPDLR 532
F + ++ +NK+D + +P V L+
Sbjct: 184 FEANL-TIVPVINKIDQPTADPERVKAQLK 212
Score = 30.3 bits (65), Expect = 1.2
Identities = 29/77 (37%), Positives = 35/77 (45%)
Frame = +3
Query: 18 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKY 197
D K EK N +I H+D GKST L+ G I K G G +Y
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK-------------GHGQPQY 102
Query: 198 AWVLDKLKAERERGITI 248
LDKL +RERGIT+
Sbjct: 103 ---LDKL--QRERGITV 114
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 35.1 bits (77), Expect = 0.043
Identities = 38/124 (30%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Frame = +3
Query: 54 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 233
N +I H+D GKST L+ G + R + K F LD + ERE
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDM-----------KEQF-----LDNMDLERE 131
Query: 234 RGITIDILSGSSKLASTMLP-SLMLLDTEISSRT*SQEPLRLIALCSS*LPVPVNSKLVS 410
RGITI + + + P L L+DT S E R +A C L V S+ V
Sbjct: 132 RGITIKLQAARMRYVYEDTPFCLNLIDTP-GHVDFSYEVSRSLAACEGALLVVDASQGVE 190
Query: 411 LRTV 422
+T+
Sbjct: 191 AQTL 194
Score = 31.5 bits (68), Expect = 0.52
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +2
Query: 266 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 445
+E + + + +ID PGH DF + + + A+L+V A G EA QT + L
Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG-VEA------QTLANVYL 199
Query: 446 AFTLGVKQLIVGVNKMD--STEPHTVSPDLRK 535
A + ++I +NK+D EP V ++ +
Sbjct: 200 ALENNL-EIIPVLNKIDLPGAEPEKVLREIEE 230
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 34.3 bits (75), Expect = 0.074
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = +3
Query: 42 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 221
K + NI ++ H+D+GK+TTT ++Y G + E+ +G+ W ++
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTGR---------NYKIGEVHEGTATMDW----ME 140
Query: 222 AERERGITI 248
E+ERGITI
Sbjct: 141 QEQERGITI 149
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +2
Query: 272 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 391
+ Y I+D PGH +F M AD AVLIV A G
Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +2
Query: 272 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 391
+ Y I+D PGH +F M AD AVLIV A G
Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 287 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 391
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 54 NIVVIGHVDSGKSTTTGHLIYKCGG 128
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 281 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 391
Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 74 YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 32.7 bits (71), Expect = 0.23
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +3
Query: 54 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 233
NI + H+DSGK+T T +++ G R E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 234 RGITI 248
+GITI
Sbjct: 117 KGITI 121
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +2
Query: 251 YSLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 430
Y WK Y V IID PGH DF + D A+L++ + G I+ + Q R
Sbjct: 127 YCTWK----DYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMR 182
Query: 431 EH 436
+
Sbjct: 183 RY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 32.7 bits (71), Expect = 0.23
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +3
Query: 54 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 233
NI + H+DSGK+T T +++ G R E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 234 RGITI 248
+GITI
Sbjct: 117 KGITI 121
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +2
Query: 251 YSLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 430
Y WK Y V IID PGH DF + D A+L++ + G I+ + Q R
Sbjct: 127 YCTWK----DYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMR 182
Query: 431 EH 436
+
Sbjct: 183 RY 184
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 30.7 bits (66), Expect = 0.92
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +2
Query: 296 IDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 472
I GH D+ + T Q +C + L+V TG F +KNG R+ LG +
Sbjct: 226 IKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELE 285
Query: 473 IVGVNKMDSTEPHTV 517
+ +DS E V
Sbjct: 286 NLSTFTLDSDEEDEV 300
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +2
Query: 293 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 472
+ID PGH F G+S D A+L+V + + G+ QT E +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756
Query: 473 IVGVNKMD 496
I+ +NK+D
Sbjct: 757 IIALNKVD 764
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +2
Query: 287 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 466
+ +ID PGH F G++ D A+L+V + G+ QT E L VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610
Query: 467 QLIVGVNKMD 496
I+ +NK+D
Sbjct: 611 -FIIALNKVD 619
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 293 IIDAPGHRDFIKNMITGTSQADCAVLIV 376
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 293 IIDAPGHRDFIKNMITGTSQADCAVLIV 376
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 275 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 376
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 54 NIVVIGHVDSGKSTTTGHLIYKCG 125
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At3g08870.1 68416.m01031 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733; contains protein kinase domain,
Pfam:PF00069; contains legume lectins alpha and beta
domains, Pfam:PF00138 and Pfam:PF00139
Length = 693
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = -1
Query: 415 LRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPERISIVIP 236
+R+ E G + ++L+G C H + + + I +G++ ++ P R IV+P
Sbjct: 406 VREFMAEIESLGRLGHKNLVNLQGWCKHKNELLLIYDYIPNGSLDSLLYQTPRRNGIVLP 465
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 514 SEPR---FEEIKKEVSSYIKKIGYNPTAVAFVP 603
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +2
Query: 296 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 475
+D PGH F G D A+++VAA G QT E A+ ++
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG-------IRPQTNE-AIAHAKAAAVPIV 608
Query: 476 VGVNKMD 496
+ +NK+D
Sbjct: 609 IAINKID 615
>At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha
subunit, chloroplast / 60 kDa chaperonin alpha subunit /
CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO
subunit binding-protein alpha subunit, chloroplast
precursor (60 kDa chaperonin alpha subunit, CPN-60
alpha) [Arabidopsis thaliana]
Length = 586
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -1
Query: 379 SYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPERISIVIPRSRSAFSLSN 206
++D+HS +L+ D + D + ++ N+VL F P+ ++ + +R A L N
Sbjct: 52 AFDQHSRAALQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKVVNDGVTIAR-AIELPN 108
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,242,495
Number of Sequences: 28952
Number of extensions: 323749
Number of successful extensions: 1051
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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