Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0645
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78410-3|CAB01641.1|  555|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z75549-8|CAD60424.1|  297|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>Z78410-3|CAB01641.1|  555|Caenorhabditis elegans Hypothetical
           protein C51E3.6 protein.
          Length = 555

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -2

Query: 429 LETVSVIYTAILFVPLALTSSLCSGS 352
           L+ V V  +A+L VPL +  S+C GS
Sbjct: 37  LQQVMVCVSALLTVPLIMADSMCPGS 62


>Z75549-8|CAD60424.1|  297|Caenorhabditis elegans Hypothetical
           protein T19C4.9 protein.
          Length = 297

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 345 VSSYRCTGMTSMLGVRTKSLYILQTPSLTFH 437
           +S+Y+   M S +   T+ +Y+L TP+L F+
Sbjct: 143 LSTYKVVIMESEIRYSTRDIYVLVTPNLPFN 173


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,966,688
Number of Sequences: 27780
Number of extensions: 258729
Number of successful extensions: 396
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)