Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0644
(563 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 202 2e-52
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 202 2e-52
SB_56| Best HMM Match : Actin (HMM E-Value=0) 202 2e-52
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 202 2e-52
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 202 2e-52
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 4e-23
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 3e-21
SB_54| Best HMM Match : Actin (HMM E-Value=0) 73 2e-13
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 58 5e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 57 1e-08
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 56 2e-08
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 54 6e-08
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 48 7e-06
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 34 0.070
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.092
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.49
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.65
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_16363| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_146| Best HMM Match : DUF836 (HMM E-Value=1.5) 30 1.5
SB_16360| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_59726| Best HMM Match : Keratin_B2 (HMM E-Value=5.9) 27 8.0
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 202 bits (493), Expect = 2e-52
Identities = 94/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
VAPEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 144
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/42 (90%), Positives = 41/42 (97%)
Frame = +1
Query: 133 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH+
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 202 bits (493), Expect = 2e-52
Identities = 94/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 36 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 95
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
VAPEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 96 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 143
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/40 (90%), Positives = 40/40 (100%)
Frame = +1
Query: 139 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH+
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 41
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 202 bits (493), Expect = 2e-52
Identities = 94/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 36 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 95
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
VAPEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 96 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 143
Score = 84.2 bits (199), Expect = 7e-17
Identities = 37/40 (92%), Positives = 40/40 (100%)
Frame = +1
Query: 139 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH+
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 41
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 202 bits (493), Expect = 2e-52
Identities = 94/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
VAPEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 144
Score = 90.2 bits (214), Expect = 1e-18
Identities = 39/42 (92%), Positives = 42/42 (100%)
Frame = +1
Query: 133 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 202 bits (493), Expect = 2e-52
Identities = 94/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
VAPEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 144
Score = 85.8 bits (203), Expect = 2e-17
Identities = 36/42 (85%), Positives = 41/42 (97%)
Frame = +1
Query: 133 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH+
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 104 bits (250), Expect = 4e-23
Identities = 48/55 (87%), Positives = 49/55 (89%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 404
G+ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 36 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 84.2 bits (199), Expect = 7e-17
Identities = 36/40 (90%), Positives = 40/40 (100%)
Frame = +1
Query: 139 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH+
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 41
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +3
Query: 477 NREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
N + M +IMFE P AIQ VLSLY
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLY 106
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 98.7 bits (235), Expect = 3e-21
Identities = 46/95 (48%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Frame = +3
Query: 282 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPILLTEA 458
KD VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P +LLTE
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEP 112
Query: 459 PLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
PLNP NREKM ++MFE+ AIQ VL+LY
Sbjct: 113 PLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLY 147
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +1
Query: 151 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHRA*WSVWD 279
+ +V DNG+G K G+AG + P +FPS+VGRP R+ V D
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGD 49
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 72.9 bits (171), Expect = 2e-13
Identities = 35/61 (57%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = +3
Query: 384 KIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTF-AIQTVLSL 560
K+W H F ++LRV E+ P+LLTEAPLNPK NRE+M Q+MFE S PC + A+Q V++L
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFE-SFNVPCMYVAVQAVMAL 2187
Query: 561 Y 563
Y
Sbjct: 2188 Y 2188
Score = 60.1 bits (139), Expect = 1e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 157 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
E LV+D GS M K GFAGDDAP+ VFP IVGRPRH+
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +3
Query: 270 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPILL 449
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +3
Query: 432 EHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
+HP+LLTEAPLNP+ NREK ++ FE P ++Q VLSLY
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLY 169
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 54.4 bits (125), Expect = 6e-08
Identities = 24/74 (32%), Positives = 42/74 (56%)
Frame = +3
Query: 342 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFEHSTR 521
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 522 PPCTFAIQTVLSLY 563
P +VL+ +
Sbjct: 63 PAFFLCKNSVLTAF 76
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 47.6 bits (108), Expect = 7e-06
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +1
Query: 127 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 252
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQ 734
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = -3
Query: 252 AGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 139
A + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 2 ARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 34.3 bits (75), Expect = 0.070
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 291 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 413
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 145 EVAALVVDNGSGMCKAGFAGDDAPRAV 225
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 33.9 bits (74), Expect = 0.092
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = -1
Query: 347 DGVFEGQDTSFALCLISYIRVLLSHTDHHALWRGLPTIEGNTARGASSPAKPALHIPEPL 168
DG F+L L + IR ++ + W GNT R PAKPAL++P P
Sbjct: 41 DGEMRAILNDFSLPLDAKIRHYNRVSNQYLKWLQQLKDGGNTNRRTRIPAKPALNLPSPP 100
Query: 167 STT 159
S T
Sbjct: 101 SKT 103
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 32.7 bits (71), Expect = 0.21
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -3
Query: 126 LVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPCSTQC 10
L++L C C+K + KR + + Q+P C C C
Sbjct: 620 LLELTTCSCEKSRCKRDDLCPCKSNQMPCTEACQCMNTC 658
>SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 32.3 bits (70), Expect = 0.28
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 138 AHLELVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPCSTQ 13
A L L+KL CRC K +R + + + IP C C+++
Sbjct: 1296 APLSLLKLTTCRCVKTACRRDDLCSCKANDIPCTEACLCTSE 1337
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.49
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 230 GNTARGASSPAKPALHIPEPLSTT 159
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 0.65
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 333 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPILLTEAPLNPKANRE 485
L+ P + +VT+++ E++ H F + P HP+++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 230 GNTARGASSPAKPALHIPEPLSTT 159
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = -1
Query: 347 DGVFEGQDTSFALCLISYIRVLLSHTDHHALWRGLPTIEGNTARGASSPAKPALHIPEPL 168
DG +L L + IR+ ++ + W GNT R PAKP L IP P
Sbjct: 29 DGEMRAILNDSSLPLDAQIRLYNRVSNQYLKWLKQVKDGGNTNRRTRIPAKPTLTIPSPP 88
Query: 167 STT 159
+ T
Sbjct: 89 TKT 91
>SB_16363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 191 PVSQEMMLLAPCSPRSWEGPATGRDGRYGTEGLLCR 298
P + + L A CSP +GP GRD RY + CR
Sbjct: 466 PQACRLTLAATCSPS--QGPCCGRDCRYVGNDISCR 499
>SB_146| Best HMM Match : DUF836 (HMM E-Value=1.5)
Length = 554
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 224 CSPRSWEGPATGRDGRYGTEGLLCR 298
C+PR W P R+GR T L CR
Sbjct: 274 CAPRQWLEPTEKREGREVTNKLRCR 298
>SB_16360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 277 PIPTITPCGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLL 143
P P + P G FP + G +E H L C Y + LLP Q++
Sbjct: 92 PSPDVVPNAGQFPNAEG--QEVHFLCTGPMCRY-AEDLLPLLQIM 133
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 230 GNTARGASSPAKPALHIPEPLSTT 159
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_59726| Best HMM Match : Keratin_B2 (HMM E-Value=5.9)
Length = 319
Score = 27.5 bits (58), Expect = 8.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 275 HTDHHALWRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 132
H HH + + LPT T SP K H P T+A T+++HI
Sbjct: 247 HCPHHPV-QTLPT-SARTNTAHISPCKHCPHQPVQTLPTSARTNTAHI 292
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +2
Query: 215 LAPCSPRSWEGPATGRDGRYGTEGL 289
+A C R+++G +GR+ GT+G+
Sbjct: 6611 VAACDARNYDGKESGRESTEGTDGI 6635
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 245 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 135
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,413,225
Number of Sequences: 59808
Number of extensions: 482194
Number of successful extensions: 1260
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1325051197
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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