Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0644
(563 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 202 1e-52
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 202 1e-52
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 202 1e-52
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 202 1e-52
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 202 1e-52
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 202 1e-52
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 202 1e-52
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 202 1e-52
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 202 1e-52
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 198 2e-51
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 195 2e-50
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 118 4e-27
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 101 5e-22
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 101 5e-22
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 101 5e-22
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 99 1e-21
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 95 2e-20
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 93 9e-20
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 62 3e-10
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.007
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.007
AL021572-1|CAA16516.2| 654|Caenorhabditis elegans Hypothetical ... 29 1.7
AF003147-1|AAB54205.2| 569|Caenorhabditis elegans Hypothetical ... 29 3.1
AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory cy... 27 7.0
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 7.0
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 7.0
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 7.0
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 7.0
AF024497-5|AAO21477.1| 871|Caenorhabditis elegans Defective in ... 27 7.0
AF024497-4|AAO21479.1| 807|Caenorhabditis elegans Defective in ... 27 7.0
AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in ... 27 7.0
AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in ... 27 7.0
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 7.0
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 9.3
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 9.3
U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna bindi... 27 9.3
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 27 9.3
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 27 9.3
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 202 bits (493), Expect = 1e-52
Identities = 94/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
VAPEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Score = 91.5 bits (217), Expect = 4e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 133 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 202 bits (493), Expect = 1e-52
Identities = 94/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
VAPEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Score = 90.2 bits (214), Expect = 9e-19
Identities = 39/42 (92%), Positives = 42/42 (100%)
Frame = +1
Query: 133 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 202 bits (493), Expect = 1e-52
Identities = 94/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
VAPEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Score = 91.5 bits (217), Expect = 4e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 133 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 202 bits (493), Expect = 1e-52
Identities = 94/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
VAPEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Score = 91.5 bits (217), Expect = 4e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 133 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 202 bits (493), Expect = 1e-52
Identities = 94/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
VAPEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Score = 91.5 bits (217), Expect = 4e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 133 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 202 bits (493), Expect = 1e-52
Identities = 94/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
VAPEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Score = 88.6 bits (210), Expect = 3e-18
Identities = 37/42 (88%), Positives = 42/42 (100%)
Frame = +1
Query: 133 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH+
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 202 bits (493), Expect = 1e-52
Identities = 94/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
VAPEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Score = 91.5 bits (217), Expect = 4e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 133 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 202 bits (493), Expect = 1e-52
Identities = 94/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 23 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 82
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
VAPEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 83 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 130
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +1
Query: 187 KAGFAGDDAPRAVFPSIVGRPRHR 258
+AGFAGDDAPRAVFPSIVGRPRH+
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQ 28
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 202 bits (493), Expect = 1e-52
Identities = 94/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
VAPEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Score = 91.5 bits (217), Expect = 4e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 133 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 198 bits (483), Expect = 2e-51
Identities = 91/108 (84%), Positives = 95/108 (87%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 36 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 95
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
+APEEHP+LLTEAPLNPK+NREKMTQIMFE P IQ VLSLY
Sbjct: 96 IAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLY 143
Score = 85.0 bits (201), Expect = 3e-17
Identities = 37/40 (92%), Positives = 40/40 (100%)
Frame = +1
Query: 139 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH+
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 41
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 195 bits (475), Expect = 2e-50
Identities = 90/100 (90%), Positives = 91/100 (91%)
Frame = +3
Query: 264 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPI 443
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP+
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 444 LLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 100
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 118 bits (283), Expect = 4e-27
Identities = 53/109 (48%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNEL 416
G+ VM G D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L
Sbjct: 39 GRPKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQL 98
Query: 417 RVAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
++ PEEHP+LLT+APLNP NRE+ +I FE P +Q VLSLY
Sbjct: 99 KIFPEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLY 147
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +1
Query: 157 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 255
+V+DNGSG+ KAGFAG+ P+ F + VGRP++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKY 43
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 101 bits (241), Expect = 5e-22
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 389
G+ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 90.2 bits (214), Expect = 9e-19
Identities = 39/42 (92%), Positives = 42/42 (100%)
Frame = +1
Query: 133 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 101 bits (241), Expect = 5e-22
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 389
G+ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 91.5 bits (217), Expect = 4e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 133 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 101 bits (241), Expect = 5e-22
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 389
G+ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 91.5 bits (217), Expect = 4e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 133 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 99 bits (238), Expect = 1e-21
Identities = 48/95 (50%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Frame = +3
Query: 282 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPILLTEA 458
KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE
Sbjct: 53 KDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEP 112
Query: 459 PLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
PLNP +NREKM Q+MFE A+Q VL+LY
Sbjct: 113 PLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLY 147
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 157 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 249
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 95.5 bits (227), Expect = 2e-20
Identities = 43/47 (91%), Positives = 44/47 (93%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 380
G+ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 90.2 bits (214), Expect = 9e-19
Identities = 39/42 (92%), Positives = 42/42 (100%)
Frame = +1
Query: 133 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 93.5 bits (222), Expect = 9e-20
Identities = 47/101 (46%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +3
Query: 261 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 437
V G+ D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 438 PILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSL 560
LLTE PLN NRE +IMFE P A+Q VL+L
Sbjct: 116 FFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLAL 156
Score = 36.7 bits (81), Expect = 0.012
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 133 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 240
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 62.1 bits (144), Expect = 3e-10
Identities = 28/73 (38%), Positives = 44/73 (60%)
Frame = +3
Query: 345 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRP 524
++ G++ +W+ EKI H++ N L P EHP+L +E+ N +A REK+T+IMFE P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 525 PCTFAIQTVLSLY 563
+ VLS +
Sbjct: 154 AYYLSKNVVLSCF 166
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 240
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.007
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +3
Query: 279 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPILLT 452
+K +V E + +L Y PIE G V NWD ++IW TF + V I LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 453 EAPLNPKANREKMTQIMFEH 512
+ A + ++I+F++
Sbjct: 98 DNNYLIPALPDVSSEILFDY 117
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.007
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +3
Query: 279 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPILLT 452
+K +V E + +L Y PIE G V NWD ++IW TF + V I LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 453 EAPLNPKANREKMTQIMFEH 512
+ A + ++I+F++
Sbjct: 98 DNNYLIPALPDVSSEILFDY 117
>AL021572-1|CAA16516.2| 654|Caenorhabditis elegans Hypothetical
protein W06H3.1 protein.
Length = 654
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 432 EHPILLTEAPLNPKANREKMTQIMFEHSTR 521
E+P + + PLNP+ EK+T+ + H T+
Sbjct: 129 ENPYIGAKTPLNPQERNEKLTESLKNHLTQ 158
>AF003147-1|AAB54205.2| 569|Caenorhabditis elegans Hypothetical
protein C11D9.1 protein.
Length = 569
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 440 NPAH*GSPQPQGQQREDDPDHVRTFN-TPAMYVRHPNR 550
NP QPQ QQ+ PDHV T N T + +P +
Sbjct: 40 NPLPSQQIQPQQQQQYHPPDHVTTHNGTTTFHTTNPTK 77
>AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory
cytoplasmic polyA polymeraseprotein.
Length = 1113
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 278 SHTDHHALWRGLPTIEGNTARGASSPAKPALHIPEPLS 165
S D L + LPT RG +SP+ P + EPLS
Sbjct: 507 SALDESTLTKILPTDNFRGGRGFASPSPPTSLLSEPLS 544
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 212 ASSPAKPALHIPEPLSTTNAATSS 141
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 212 ASSPAKPALHIPEPLSTTNAATSS 141
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 212 ASSPAKPALHIPEPLSTTNAATSS 141
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 212 ASSPAKPALHIPEPLSTTNAATSS 141
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF024497-5|AAO21477.1| 871|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform b protein.
Length = 871
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 278 SHTDHHALWRGLPTIEGNTARGASSPAKPALHIPEPLS 165
S D L + LPT RG +SP+ P + EPLS
Sbjct: 265 SALDESTLTKILPTDNFRGGRGFASPSPPTSLLSEPLS 302
>AF024497-4|AAO21479.1| 807|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform d protein.
Length = 807
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 278 SHTDHHALWRGLPTIEGNTARGASSPAKPALHIPEPLS 165
S D L + LPT RG +SP+ P + EPLS
Sbjct: 201 SALDESTLTKILPTDNFRGGRGFASPSPPTSLLSEPLS 238
>AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform c protein.
Length = 1036
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 278 SHTDHHALWRGLPTIEGNTARGASSPAKPALHIPEPLS 165
S D L + LPT RG +SP+ P + EPLS
Sbjct: 430 SALDESTLTKILPTDNFRGGRGFASPSPPTSLLSEPLS 467
>AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform a protein.
Length = 1113
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 278 SHTDHHALWRGLPTIEGNTARGASSPAKPALHIPEPLS 165
S D L + LPT RG +SP+ P + EPLS
Sbjct: 507 SALDESTLTKILPTDNFRGGRGFASPSPPTSLLSEPLS 544
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 371 PVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 261
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 339 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 440
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 339 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 440
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform a protein.
Length = 868
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 435 HPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVL 554
+PI APL+ K+ R+K T+ HS +PP + VL
Sbjct: 630 YPISKPTAPLDAKSPRKKKTR----HSEKPPVEMPVAWVL 665
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 435 HPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVL 554
+PI APL+ K+ R+K T+ HS +PP + VL
Sbjct: 827 YPISKPTAPLDAKSPRKKKTR----HSEKPPVEMPVAWVL 862
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 187 KAGFAGDDAPRAVFPSIVGRPRHR 258
KA + G D P+A F I+G +R
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYR 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,458,823
Number of Sequences: 27780
Number of extensions: 331095
Number of successful extensions: 1099
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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