Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0644
(563 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 197 5e-51
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 197 5e-51
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 197 5e-51
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 196 6e-51
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 196 6e-51
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 196 8e-51
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 194 3e-50
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 194 3e-50
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 194 3e-50
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 182 2e-46
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 159 1e-39
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 151 3e-37
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 103 8e-23
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 87 8e-18
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 78 5e-15
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 68 4e-12
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 50 1e-06
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 48 6e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 45 4e-05
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 31 0.53
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 29 2.8
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.8
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.8
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 5.0
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 5.0
At2g17787.1 68415.m02061 expressed protein 28 5.0
At2g17480.1 68415.m02019 seven transmembrane MLO family protein ... 28 5.0
At4g36790.1 68417.m05219 transporter-related low similarity to s... 27 6.5
At3g06920.1 68416.m00821 pentatricopeptide (PPR) repeat-containi... 27 6.5
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 27 8.7
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 197 bits (480), Expect = 5e-51
Identities = 92/108 (85%), Positives = 94/108 (87%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 97
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
VAPEEHPILLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 98 VAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY 145
Score = 71.3 bits (167), Expect = 4e-13
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRH 42
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 197 bits (480), Expect = 5e-51
Identities = 91/108 (84%), Positives = 95/108 (87%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR 97
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
VAPEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 98 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 145
Score = 71.3 bits (167), Expect = 4e-13
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRH 42
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 197 bits (480), Expect = 5e-51
Identities = 92/108 (85%), Positives = 94/108 (87%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 97
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
VAPEEHPILLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 98 VAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY 145
Score = 71.3 bits (167), Expect = 4e-13
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRH 42
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 196 bits (479), Expect = 6e-51
Identities = 91/108 (84%), Positives = 94/108 (87%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 97
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
VAPEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 98 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 145
Score = 71.3 bits (167), Expect = 4e-13
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRH 42
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 196 bits (479), Expect = 6e-51
Identities = 91/108 (84%), Positives = 94/108 (87%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 97
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
VAPEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 98 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 145
Score = 71.3 bits (167), Expect = 4e-13
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRH 42
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 196 bits (478), Expect = 8e-51
Identities = 91/108 (84%), Positives = 95/108 (87%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR 97
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
VAPEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 98 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLY 145
Score = 71.3 bits (167), Expect = 4e-13
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRH 42
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 194 bits (473), Expect = 3e-50
Identities = 88/108 (81%), Positives = 94/108 (87%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELR 97
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
+APEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 98 IAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 145
Score = 68.9 bits (161), Expect = 2e-12
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 255
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRH 42
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 194 bits (473), Expect = 3e-50
Identities = 88/108 (81%), Positives = 94/108 (87%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELR 97
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
+APEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 98 IAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 145
Score = 68.9 bits (161), Expect = 2e-12
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 255
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRH 42
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 194 bits (473), Expect = 3e-50
Identities = 88/108 (81%), Positives = 94/108 (87%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELR 97
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
+APEEHP+LLTEAPLNPKANREKMTQIMFE P AIQ VLSLY
Sbjct: 98 IAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 145
Score = 68.9 bits (161), Expect = 2e-12
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 255
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRH 42
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 182 bits (442), Expect = 2e-46
Identities = 81/108 (75%), Positives = 92/108 (85%)
Frame = +3
Query: 240 GKAPPQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 419
G+ +GVMVGM +KD++VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR
Sbjct: 39 GRPRHRGVMVGMDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELR 98
Query: 420 VAPEEHPILLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
+ PEEHPILLTEAPLNPK NREKMTQIMFE P IQ VLSLY
Sbjct: 99 LEPEEHPILLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQAVLSLY 146
Score = 72.5 bits (170), Expect = 2e-13
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHR 258
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRHR
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHR 44
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 159 bits (386), Expect = 1e-39
Identities = 69/100 (69%), Positives = 84/100 (84%)
Frame = +3
Query: 264 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPI 443
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHP+
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 444 LLTEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
LLTEAPLNPKA+REKMTQIMFE P +Q LSL+
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLH 100
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 151 bits (366), Expect = 3e-37
Identities = 68/98 (69%), Positives = 78/98 (79%)
Frame = +3
Query: 270 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPILL 449
G+ +SYVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP+LL
Sbjct: 37 GLNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLL 96
Query: 450 TEAPLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
TEAP NPKANREKMTQIMFE P ++Q+VL LY
Sbjct: 97 TEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLY 134
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +1
Query: 157 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 252
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 103 bits (247), Expect = 8e-23
Identities = 47/94 (50%), Positives = 58/94 (61%)
Frame = +3
Query: 282 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPILLTEAP 461
KD VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + ILLT+ P
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPP 110
Query: 462 LNPKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
LNP NREKM + MFE IQ VL+LY
Sbjct: 111 LNPSKNREKMIETMFEKYNFAGVFIQIQAVLTLY 144
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 157 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 249
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 87.0 bits (206), Expect = 8e-18
Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Frame = +3
Query: 285 DSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPILLTE 455
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 456 APLNPKANREKMTQIMFEHSTRPPCTFAIQTVLSL 560
+PL P +RE +I+FE P A+ +VL+L
Sbjct: 127 SPLTPPESREYTGEILFETFNVPGLYIAVNSVLAL 161
Score = 35.9 bits (79), Expect = 0.019
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 154 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 240
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 77.8 bits (183), Expect = 5e-15
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +3
Query: 291 YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLN 467
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 468 PKANREKMTQIMFEHSTRPPCTFAIQTVLSLY 563
+ REK ++MFE P A VL+ +
Sbjct: 136 TQQQREKAAELMFEKYKVPALFMAKNPVLTSF 167
Score = 56.8 bits (131), Expect = 9e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 243
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +3
Query: 276 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPILLT 452
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 453 EAPLNPKANREK 488
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 7e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 243
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 49.6 bits (113), Expect = 1e-06
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 342 PIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPILLTEAPLNPKANREKMTQIMFEHST 518
PIE G++ +WD ME + + Y L E IL T+ PKA RE++ Q+MFE
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 519 RPPCTFAIQTVLSLY 563
+ Q VLSLY
Sbjct: 117 VSGFYASEQAVLSLY 131
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 154 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 246
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 47.6 bits (108), Expect = 6e-06
Identities = 21/59 (35%), Positives = 35/59 (59%)
Frame = +3
Query: 333 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFE 509
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFE 119
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 157 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 249
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 44.8 bits (101), Expect = 4e-05
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1
Query: 157 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHRA 261
+V+DNG+ + G+AG+ PR VF +IV RPRH+A
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKA 56
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 342 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPILLTEAPLNPKANREKMTQIMFEHST 518
P + +V ++ ME I + F + +HPIL+TE NP +R KM +++FE
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 519 RPPCTFAIQTVLS 557
P F + S
Sbjct: 145 VPAVAFGVDAAFS 157
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 31.1 bits (67), Expect = 0.53
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = -1
Query: 392 PNLLHVIPVSDDSVFDGVFEGQDT--SFALCLISYIRVLLSHTDHHALWRGLPTIEGNTA 219
P L V+ ++ D + + + + YI + T RGL +G T+
Sbjct: 249 PYLTDVMILTPGQTVDALLTADQAIGKYYMATLPYISAIGIPTPDIKPTRGLIVYQGATS 308
Query: 218 RGASSPAKPALHIPEPLSTTNAATSS 141
+SSPA+P + +P +ST + TS+
Sbjct: 309 --SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = -1
Query: 272 TDHHALWRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 132
+D WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 161 SDGEITWRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +3
Query: 300 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 479
D A L++KY + H I + W + +IW L+ P P+ T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 480 REK 488
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +3
Query: 300 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 479
D A L++KY + H I + W + +IW L+ P P+ T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 480 REK 488
REK
Sbjct: 225 REK 227
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2
Query: 388 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 299
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -1
Query: 380 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 273
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At2g17787.1 68415.m02061 expressed protein
Length = 324
Score = 27.9 bits (59), Expect = 5.0
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +2
Query: 119 FTNSRCATKKLPRW**TMAPVCARPVSQE--MMLLAPCSPRSWEGPATGRDGRYGTEGLL 292
F +SR T KL + ++ R VS+E M L+ C+P E P + G LL
Sbjct: 182 FGSSREITTKLNKEKKSVPSKDNRKVSKEKKMPSLSSCNPLEQEKPTSSHQETPGPSKLL 241
Query: 293 CRR 301
CR+
Sbjct: 242 CRK 244
>At2g17480.1 68415.m02019 seven transmembrane MLO family protein /
MLO-like protein 8 (MLO8) identical to membrane protein
Mlo8 [Arabidopsis thaliana] gi|14091586|gb|AAK53801;
similar to MLO protein SWISS-PROT:P93766,
NCBI_gi:1877221 [Hordeum vulgare][Barley]
Length = 593
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 290 RVLLSHTDHHALWRGLPTIEGN 225
R+ L TD HA+ +G+P ++GN
Sbjct: 355 RMALGITDRHAVVQGMPLVQGN 376
>At4g36790.1 68417.m05219 transporter-related low similarity to
spinster membrane proteins from [Drosophila
melanogaster] GI:12003976, GI:12003972, GI:12003974,
GI:12003970; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 489
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -1
Query: 350 FDGVFEGQDTSFALCLISYIRVLLSHTDHHALWRGLPTIEGNTARGASSPAKPAL 186
FD FEG +SFA L+ + L D RG+ ++G++ R A + +K L
Sbjct: 400 FDRAFEGSFSSFAAPLVGILSEKLFGYDS----RGIDPLKGSSVREADALSKGLL 450
>At3g06920.1 68416.m00821 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 871
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +3
Query: 471 KANREKMTQIMFEH---STRPPCTFAIQTVLSLY 563
KANR MFEH + R PCT+A T++ Y
Sbjct: 285 KANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGY 318
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 439 GCSSGATRSSL*-KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 281
GC G T++ L C+ +S+ + TIP + Y + PL LC T + +
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDTDDKY 506
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,774,238
Number of Sequences: 28952
Number of extensions: 310863
Number of successful extensions: 841
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1082538160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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