Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0643
         (541 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.0  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.2  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   9.2  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   9.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.2  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 435 KCTYLT*PKSWRSTKPVSRLYRF 503
           KC Y+  P+ +   K   RL+RF
Sbjct: 229 KCIYVFNPRYYLEKKVTRRLHRF 251


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 435 KCTYLT*PKSWRSTKPVSRLYRF 503
           KC Y+  P+ +   K   RL+RF
Sbjct: 229 KCIYVFNPRYYLEKKVTRRLHRF 251


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 268 SITPREDRRMRSFVPRQVPDSPLRSHHR*TNIR 366
           S+  + + R   FVPR+VP     +  R  NI+
Sbjct: 319 SVEGQLEFRALLFVPRRVPFDLFENKKRKNNIK 351


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 66  YHAGCWYTENGSELSRQLDLWLSK 137
           Y  GC  T   S+   Q+ LW+ +
Sbjct: 94  YFKGCIDTLQRSDEEAQIQLWIKQ 117


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 66  YHAGCWYTENGSELSRQLDLWLSK 137
           Y  GC  T   S+   Q+ LW+ +
Sbjct: 94  YFKGCIDTLQRSDEEAQIQLWIKQ 117


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 55  VVKHTMLDVGTPKMVANS 108
           V+K + LD+ T KM+  S
Sbjct: 490 VIKSSFLDINTWKMLVKS 507


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,727
Number of Sequences: 336
Number of extensions: 2767
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)