Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0641
         (561 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC112165-1|AAI12166.1| 1444|Homo sapiens Cdc42 GTPase-activating...    31   3.7  
BC112163-1|AAI12164.1| 1444|Homo sapiens Cdc42 GTPase-activating...    31   3.7  
AB033030-1|BAA86518.1| 1445|Homo sapiens KIAA1204 protein protein.     31   3.7  
BC130569-1|AAI30570.1|  749|Homo sapiens fibronectin type III an...    29   8.5  

>BC112165-1|AAI12166.1| 1444|Homo sapiens Cdc42 GTPase-activating
           protein protein.
          Length = 1444

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = +1

Query: 289 MPTCSIEQAEAVRQYYAAFPALKKGQESPLQYYLPPPAWCHKTVTEVTAKMQCQLSPSKD 468
           M   S+E+A+A R      PA K+ +E+ L   +PP      TV E+    +   S SK 
Sbjct: 245 MKLVSLEEAQA-RSLATNHPARKERRENSLPEIVPPMGTLFHTVLELPDNKRKLSSKSKK 303

Query: 469 W 471
           W
Sbjct: 304 W 304


>BC112163-1|AAI12164.1| 1444|Homo sapiens Cdc42 GTPase-activating
           protein protein.
          Length = 1444

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = +1

Query: 289 MPTCSIEQAEAVRQYYAAFPALKKGQESPLQYYLPPPAWCHKTVTEVTAKMQCQLSPSKD 468
           M   S+E+A+A R      PA K+ +E+ L   +PP      TV E+    +   S SK 
Sbjct: 245 MKLVSLEEAQA-RSLATNHPARKERRENSLPEIVPPMGTLFHTVLELPDNKRKLSSKSKK 303

Query: 469 W 471
           W
Sbjct: 304 W 304


>AB033030-1|BAA86518.1| 1445|Homo sapiens KIAA1204 protein protein.
          Length = 1445

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = +1

Query: 289 MPTCSIEQAEAVRQYYAAFPALKKGQESPLQYYLPPPAWCHKTVTEVTAKMQCQLSPSKD 468
           M   S+E+A+A R      PA K+ +E+ L   +PP      TV E+    +   S SK 
Sbjct: 246 MKLVSLEEAQA-RSLATNHPARKERRENSLPEIVPPMGTLFHTVLELPDNKRKLSSKSKK 304

Query: 469 W 471
           W
Sbjct: 305 W 305


>BC130569-1|AAI30570.1|  749|Homo sapiens fibronectin type III and
           SPRY domain containing 2 protein.
          Length = 749

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +1

Query: 250 SPDIKDHEDSVIGMPTC-SIEQAEAVRQYYAAFPALKKGQES 372
           SP+     +SV+G+PTC S+ Q +  R Y     AL  G  S
Sbjct: 510 SPEASGVTESVVGIPTCESVVQLQPGRSYIIYVRALNMGGPS 551


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,599,715
Number of Sequences: 237096
Number of extensions: 1907382
Number of successful extensions: 4080
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4080
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)