Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0640
         (532 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    26   0.24 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    26   0.24 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.42 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    24   0.73 
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    24   0.73 
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    24   0.73 
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    24   0.73 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   2.9  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   2.9  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   5.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.1  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   6.8  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   6.8  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.9  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 25.8 bits (54), Expect = 0.24
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -1

Query: 61  CGHSQCVSRDLFCH 20
           CG+ +C+ ++LFC+
Sbjct: 116 CGNGECIDKELFCN 129



 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 61  CGHSQCVSRDLFC 23
           C  +QCV  D FC
Sbjct: 155 CDPTQCVLPDCFC 167


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 25.8 bits (54), Expect = 0.24
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -1

Query: 61  CGHSQCVSRDLFCH 20
           CG+ +C+ ++LFC+
Sbjct: 123 CGNGECIDKELFCN 136



 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 61  CGHSQCVSRDLFC 23
           C  +QCV  D FC
Sbjct: 162 CDPTQCVLPDCFC 174


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 25.0 bits (52), Expect = 0.42
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 506 VLGYLGSTFREMSSFGVIWKVKSSWCPK 423
           +L YL  T  EM    ++W   S+ CP+
Sbjct: 240 ILTYLIWTIYEMYHLAILWSCTSTNCPR 267


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 24.2 bits (50), Expect = 0.73
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 61  CGHSQCVSRDLFCH 20
           CG   C+ R LFC+
Sbjct: 124 CGDGNCIERGLFCN 137


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 24.2 bits (50), Expect = 0.73
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +3

Query: 81  MNSTPVAGGAMVKTRCGIISNNSSEHSPWNIRYKMQREPKSLRRPRGSKRSVRMGLSTSE 260
           +NS  V GG +V + C I       H      ++ + + ++ +  RG  RS+ M LS   
Sbjct: 6   VNSVIVVGGGLVGSLCAIFMAKRGYHV---TLFEYREDIRTAKFARG--RSINMALSNRG 60

Query: 261 R 263
           R
Sbjct: 61  R 61


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 24.2 bits (50), Expect = 0.73
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +3

Query: 81  MNSTPVAGGAMVKTRCGIISNNSSEHSPWNIRYKMQREPKSLRRPRGSKRSVRMGLSTSE 260
           +NS  V GG +V + C I       H      ++ + + ++ +  RG  RS+ M LS   
Sbjct: 6   VNSVIVVGGGLVGSLCAIFMAKRGYHV---TLFEYREDIRTAKFARG--RSINMALSNRG 60

Query: 261 R 263
           R
Sbjct: 61  R 61


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 24.2 bits (50), Expect = 0.73
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +3

Query: 81  MNSTPVAGGAMVKTRCGIISNNSSEHSPWNIRYKMQREPKSLRRPRGSKRSVRMGLSTSE 260
           +NS  V GG +V + C I       H      ++ + + ++ +  RG  RS+ M LS   
Sbjct: 6   VNSVIVVGGGLVGSLCAIFMAKRGYHV---TLFEYREDIRTAKFARG--RSINMALSNRG 60

Query: 261 R 263
           R
Sbjct: 61  R 61


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 190 GNRSPSADPEVPNDP 234
           G  SP  DPE+P  P
Sbjct: 76  GTTSPEPDPEIPVAP 90


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -1

Query: 532 KEYFCNFKEYWDIWGRHLERC 470
           K+Y C  K +W+   R+   C
Sbjct: 51  KQYTCELKLWWEFCQRNGHNC 71


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +1

Query: 133 SSRTIPQSTPHGTYGTKCRGNRSPSADP 216
           S R     TPHG+  +      SPSA P
Sbjct: 247 SYRPTGNITPHGSNTSSLITTPSPSASP 274


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 121 RDAVSSRTIPQSTPHGTYGTKCRGNRSPSA 210
           + +VS  T P+       G+ CR + SP++
Sbjct: 910 KPSVSPLTSPRQPAETHAGSPCRNSASPAS 939


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 6/27 (22%), Positives = 11/27 (40%)
 Frame = -2

Query: 258 RMSIIPFSRIVWNLWVCGGTSVPSAFC 178
           R   + F  + WN W+       + +C
Sbjct: 274 RQMYVDFGSVGWNDWIVAPLGYDAYYC 300


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 326 PIYGPGLPNTSFFHLTPYRGGP 261
           P Y   L N + +H   +RG P
Sbjct: 40  PYYYQYLQNAALYHKLQFRGPP 61


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 451 QMTPKLDISLNVDPKYPNT 507
           Q TP + +S+N+    PNT
Sbjct: 131 QSTPGIKLSINIILSDPNT 149


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,264
Number of Sequences: 336
Number of extensions: 3735
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)