Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0640
(532 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 31 0.024
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 27 0.30
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 25 1.2
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 24 2.8
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 24 2.8
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 24 2.8
AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein p... 24 3.7
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 24 3.7
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 23 4.8
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 23 8.4
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 23 8.4
AM085517-1|CAJ30215.1| 339|Anopheles gambiae putative angiotens... 23 8.4
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 31.1 bits (67), Expect = 0.024
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = -2
Query: 492 GVDI*RDVQFRSHLEGKVKLVSKMLGVFNRVKRYFTHGQRL-LIYKAQVRP*VEYCSHLW 316
GV + + F+ H++ V +++LGV R F + + +Y VR +EY +W
Sbjct: 848 GVLLDSSLNFKQHIDDVVARGNQLLGVVIRTTNEFRNPMCIKAVYNCIVRSVLEYSCVVW 907
Query: 315 AGAPKYQLLPFDSI*RRAVRMSI 247
+ + ++I R+ R ++
Sbjct: 908 SPTTASSIARIEAIQRKLTRYAL 930
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 27.5 bits (58), Expect = 0.30
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = -2
Query: 528 SIFATLRSIGIFGVDI*RDVQFRSHLEGKVKLVSKMLGVFNRVKRYFTHGQRLL-IYKAQ 352
S + + SI G+ + + F+ L+ + ++ LG R F L +Y A
Sbjct: 765 SSLSRVLSIRDLGIILDSRLNFKLQLDEVLLKANRTLGFILRFTSIFRDQSFLRNLYYAL 824
Query: 351 VRP*VEYCSHLW 316
VRP +EY S +W
Sbjct: 825 VRPLLEYASIIW 836
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 25.4 bits (53), Expect = 1.2
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 156 HSPWNIRYKMQREPKSLRRPRGSKRSVRMGLSTSERP 266
H P +R + + ++ PRGS R R G S P
Sbjct: 817 HDPQKLRIVVSKSANAMHPPRGS-RHTRQGSEASSPP 852
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 24.2 bits (50), Expect = 2.8
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +3
Query: 189 REPKSLRRPRGSKRSVRMGLSTSERPSSIWSQMEEAGIWEPRPI 320
R LRRPRG +R+ E I E+G E P+
Sbjct: 286 RRRSRLRRPRGKRRNTIASSDQREIAEVINKGEPESGTVEEHPV 329
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 24.2 bits (50), Expect = 2.8
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +3
Query: 189 REPKSLRRPRGSKRSVRMGLSTSERPSSIWSQMEEAGIWEPRPI 320
R LRRPRG +R+ E I E+G E P+
Sbjct: 287 RRRSRLRRPRGKRRNTIASSDQREIAEVINKGEPESGTVEEHPV 330
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 24.2 bits (50), Expect = 2.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 510 RSIGIFGVDI*RDVQFRSHLEGKVKLVSKML 418
RS+ GV I ++F+SHLE K V K +
Sbjct: 764 RSLKYLGVVIDDRLKFKSHLEEACKKVMKAI 794
>AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein
protein.
Length = 353
Score = 23.8 bits (49), Expect = 3.7
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 216 RGSKRSVRMGLSTSERPSSIWSQMEEAGIWEPRPIDG 326
RG+ S +S+S R SS + +G RP+ G
Sbjct: 34 RGNSGSPLSSISSSSRNSSSCNNSSSSGTHSDRPVAG 70
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 23.8 bits (49), Expect = 3.7
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = +3
Query: 264 PSSIWSQMEEAGIWEPRPIDGSSTPL 341
P +W + + +P+PI+ +TP+
Sbjct: 13 PYQLWPRKGSVVVMQPQPIERPATPM 38
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.4 bits (48), Expect = 4.8
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = -2
Query: 516 TLRSIGIFGVDI*RDVQFRSHLE---GKVKLVSKMLGVFNRVKRYFTHGQRLLIYKAQVR 346
T RSI GV I + ++SH+E K +K LG R +R L+ + V
Sbjct: 747 TTRSIRYLGVVIDNQLSWKSHVEYCTTKALRTAKALGCLMRNHSGPKCAKRRLL-ASVVD 805
Query: 345 P*VEYCSHLWAGAPKYQ 295
+ Y + +W A K Q
Sbjct: 806 SILRYAAPVWHEATKNQ 822
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 22.6 bits (46), Expect = 8.4
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +2
Query: 95 GGGRCDGKNEMRYHLEQFLRALPMEHTVQNAEGTEVPPQT 214
GGG G + +HL + ++ V + +GT++P T
Sbjct: 466 GGG--GGGSRYEHHLSRHASSILPSSLVSSPDGTDLPHHT 503
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 22.6 bits (46), Expect = 8.4
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +2
Query: 95 GGGRCDGKNEMRYHLEQFLRALPMEHTVQNAEGTEVPPQT 214
GGG G + +HL + ++ V + +GT++P T
Sbjct: 442 GGG--GGGSRYEHHLSRHASSILPSSLVSSPDGTDLPHHT 479
>AM085517-1|CAJ30215.1| 339|Anopheles gambiae putative angiotensin
converting enzymeprecursor protein.
Length = 339
Score = 22.6 bits (46), Expect = 8.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 187 RGNRSPSADPEVPNDP*EWDYRHPNGPPLYG 279
R +P+A P PNDP + R+P P G
Sbjct: 196 RNRYNPNARPYNPNDP-SFGGRNPPDPNYRG 225
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,742
Number of Sequences: 2352
Number of extensions: 15898
Number of successful extensions: 44
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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