Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0640
(532 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U78311-1|AAB80695.1| 1382|Homo sapiens translation initiation fa... 31 2.5
U58046-1|AAB41584.1| 1382|Homo sapiens p167 protein. 31 2.5
D50929-1|BAA09488.2| 1388|Homo sapiens KIAA0139 protein. 31 2.5
BC114429-1|AAI14430.1| 1382|Homo sapiens eukaryotic translation ... 31 2.5
BC014625-1|AAH14625.1| 401|Homo sapiens EIF3S10 protein protein. 31 2.5
AL355598-2|CAI14127.1| 1382|Homo sapiens eukaryotic translation ... 31 2.5
BC019000-1|AAH19000.1| 283|Homo sapiens ZC3H13 protein protein. 30 5.8
AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein pr... 30 5.8
AL831833-1|CAD38544.1| 796|Homo sapiens hypothetical protein pr... 30 5.8
AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type c... 30 5.8
AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type c... 30 5.8
AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type c... 30 5.8
AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type c... 30 5.8
EF015905-1|ABM64216.1| 1255|Homo sapiens period 2 protein. 29 7.7
BC060789-1|AAH60789.1| 742|Homo sapiens collectin sub-family me... 29 7.7
AC012485-1|AAX88976.1| 1255|Homo sapiens unknown protein. 29 7.7
AB052103-1|BAB39148.1| 622|Homo sapiens scavenger receptor with... 29 7.7
AB038518-1|BAB39147.1| 742|Homo sapiens scavenger receptor with... 29 7.7
AB034251-1|BAD83592.1| 742|Homo sapiens nurse cell scavenger re... 29 7.7
AB005145-1|BAB72147.1| 742|Homo sapiens collectin placenta 1 pr... 29 7.7
AB002345-1|BAA20804.2| 1281|Homo sapiens KIAA0347 protein protein. 29 7.7
>U78311-1|AAB80695.1| 1382|Homo sapiens translation initiation
factor 3 large subunit protein.
Length = 1382
Score = 31.1 bits (67), Expect = 2.5
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 174 RYKMQREPKSLRRPRGSKRSVRMGLSTSERPSSIWSQMEEAGIWEPRP 317
R K QRE + R R + R+G S+ R S W + G W P
Sbjct: 856 RKKRQRELEIEERERRREEERRLGDSSLSRKDSRWGDRDSEGTWRKGP 903
>U58046-1|AAB41584.1| 1382|Homo sapiens p167 protein.
Length = 1382
Score = 31.1 bits (67), Expect = 2.5
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 174 RYKMQREPKSLRRPRGSKRSVRMGLSTSERPSSIWSQMEEAGIWEPRP 317
R K QRE + R R + R+G S+ R S W + G W P
Sbjct: 856 RKKRQRELEIEERERRREEERRLGDSSLSRKDSRWGDRDSEGTWRKGP 903
>D50929-1|BAA09488.2| 1388|Homo sapiens KIAA0139 protein.
Length = 1388
Score = 31.1 bits (67), Expect = 2.5
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 174 RYKMQREPKSLRRPRGSKRSVRMGLSTSERPSSIWSQMEEAGIWEPRP 317
R K QRE + R R + R+G S+ R S W + G W P
Sbjct: 862 RKKRQRELEIEERERRREEERRLGDSSLSRKDSRWGDRDSEGTWRKGP 909
>BC114429-1|AAI14430.1| 1382|Homo sapiens eukaryotic translation
initiation factor 3, subunit A protein.
Length = 1382
Score = 31.1 bits (67), Expect = 2.5
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 174 RYKMQREPKSLRRPRGSKRSVRMGLSTSERPSSIWSQMEEAGIWEPRP 317
R K QRE + R R + R+G S+ R S W + G W P
Sbjct: 856 RKKRQRELEIEERERRREEERRLGDSSLSRKDSRWGDRDSEGTWRKGP 903
>BC014625-1|AAH14625.1| 401|Homo sapiens EIF3S10 protein protein.
Length = 401
Score = 31.1 bits (67), Expect = 2.5
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 174 RYKMQREPKSLRRPRGSKRSVRMGLSTSERPSSIWSQMEEAGIWEPRP 317
R K QRE + R R + R+G S+ R S W + G W P
Sbjct: 78 RKKRQRELEIEERERRREEERRLGDSSLSRKDSRWGDRDSEGTWRKGP 125
>AL355598-2|CAI14127.1| 1382|Homo sapiens eukaryotic translation
initiation factor 3, subunit 10 theta, 150/170kDa
protein.
Length = 1382
Score = 31.1 bits (67), Expect = 2.5
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 174 RYKMQREPKSLRRPRGSKRSVRMGLSTSERPSSIWSQMEEAGIWEPRP 317
R K QRE + R R + R+G S+ R S W + G W P
Sbjct: 856 RKKRQRELEIEERERRREEERRLGDSSLSRKDSRWGDRDSEGTWRKGP 903
>BC019000-1|AAH19000.1| 283|Homo sapiens ZC3H13 protein protein.
Length = 283
Score = 29.9 bits (64), Expect = 5.8
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 118 KRDAVSSRTIPQSTPHGTYGTKCRGNRSPSADPEVPND 231
K AVSS + Q T +K +G R+PS P +P D
Sbjct: 236 KTSAVSSPLLDQQRNSKTNQSKKKGPRTPSPPPPIPED 273
>AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein
protein.
Length = 1564
Score = 29.9 bits (64), Expect = 5.8
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 118 KRDAVSSRTIPQSTPHGTYGTKCRGNRSPSADPEVPND 231
K AVSS + Q T +K +G R+PS P +P D
Sbjct: 236 KTSAVSSPLLDQQRNSKTNQSKKKGPRTPSPPPPIPED 273
>AL831833-1|CAD38544.1| 796|Homo sapiens hypothetical protein
protein.
Length = 796
Score = 29.9 bits (64), Expect = 5.8
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 118 KRDAVSSRTIPQSTPHGTYGTKCRGNRSPSADPEVPND 231
K AVSS + Q T +K +G R+PS P +P D
Sbjct: 61 KTSAVSSPLLDQQRNSKTNQSKKKGPRTPSPPPPIPED 98
>AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 29.9 bits (64), Expect = 5.8
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 118 KRDAVSSRTIPQSTPHGTYGTKCRGNRSPSADPEVPND 231
K AVSS + Q T +K +G R+PS P +P D
Sbjct: 236 KTSAVSSPLLDQQRNSKTNQSKKKGPRTPSPPPPIPED 273
>AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 29.9 bits (64), Expect = 5.8
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 118 KRDAVSSRTIPQSTPHGTYGTKCRGNRSPSADPEVPND 231
K AVSS + Q T +K +G R+PS P +P D
Sbjct: 236 KTSAVSSPLLDQQRNSKTNQSKKKGPRTPSPPPPIPED 273
>AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 29.9 bits (64), Expect = 5.8
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 118 KRDAVSSRTIPQSTPHGTYGTKCRGNRSPSADPEVPND 231
K AVSS + Q T +K +G R+PS P +P D
Sbjct: 236 KTSAVSSPLLDQQRNSKTNQSKKKGPRTPSPPPPIPED 273
>AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 29.9 bits (64), Expect = 5.8
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 118 KRDAVSSRTIPQSTPHGTYGTKCRGNRSPSADPEVPND 231
K AVSS + Q T +K +G R+PS P +P D
Sbjct: 236 KTSAVSSPLLDQQRNSKTNQSKKKGPRTPSPPPPIPED 273
>EF015905-1|ABM64216.1| 1255|Homo sapiens period 2 protein.
Length = 1255
Score = 29.5 bits (63), Expect = 7.7
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +3
Query: 135 ISNNSSEHSPWNIRYKMQREPKSLR-RPRGSKRSVRMGLSTSERPSSIWSQMEEAGIWEP 311
+ N S SPW K R+ KS R +PR S S G S RP + A W P
Sbjct: 778 LRNTSGIDSPWKKTGK-NRKLKSKRVKPRDSSESTGSGGPVSARPPLVGL---NATAWSP 833
Query: 312 RPIDGSSTP 338
SS P
Sbjct: 834 SDTSQSSCP 842
>BC060789-1|AAH60789.1| 742|Homo sapiens collectin sub-family
member 12 protein.
Length = 742
Score = 29.5 bits (63), Expect = 7.7
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 160 PHGTYGTKCR-GNRSPSADPEVPNDP*EWDYRHPNGPP-LYGVKWKKLVFGSPGP 318
P G+ G+ + G + PS DP P P + P GPP G++ G PGP
Sbjct: 507 PKGSRGSPGKPGPQGPSGDPGPPGPPGKEGLPGPQGPPGFQGLQGTVGEPGVPGP 561
>AC012485-1|AAX88976.1| 1255|Homo sapiens unknown protein.
Length = 1255
Score = 29.5 bits (63), Expect = 7.7
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +3
Query: 135 ISNNSSEHSPWNIRYKMQREPKSLR-RPRGSKRSVRMGLSTSERPSSIWSQMEEAGIWEP 311
+ N S SPW K R+ KS R +PR S S G S RP + A W P
Sbjct: 778 LRNTSGIDSPWKKTGK-NRKLKSKRVKPRDSSESTGSGGPVSARPPLVGL---NATAWSP 833
Query: 312 RPIDGSSTP 338
SS P
Sbjct: 834 SDTSQSSCP 842
>AB052103-1|BAB39148.1| 622|Homo sapiens scavenger receptor with
C-type lectin type II protein.
Length = 622
Score = 29.5 bits (63), Expect = 7.7
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 160 PHGTYGTKCR-GNRSPSADPEVPNDP*EWDYRHPNGPP-LYGVKWKKLVFGSPGP 318
P G+ G+ + G + PS DP P P + P GPP G++ G PGP
Sbjct: 507 PKGSRGSPGKPGPQGPSGDPGPPGPPGKEGLPGPQGPPGFQGLQGTVGEPGVPGP 561
>AB038518-1|BAB39147.1| 742|Homo sapiens scavenger receptor with
C-type lectin type I protein.
Length = 742
Score = 29.5 bits (63), Expect = 7.7
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 160 PHGTYGTKCR-GNRSPSADPEVPNDP*EWDYRHPNGPP-LYGVKWKKLVFGSPGP 318
P G+ G+ + G + PS DP P P + P GPP G++ G PGP
Sbjct: 507 PKGSRGSPGKPGPQGPSGDPGPPGPPGKEGLPGPQGPPGFQGLQGTVGEPGVPGP 561
>AB034251-1|BAD83592.1| 742|Homo sapiens nurse cell scavenger
receptor 2 protein.
Length = 742
Score = 29.5 bits (63), Expect = 7.7
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 160 PHGTYGTKCR-GNRSPSADPEVPNDP*EWDYRHPNGPP-LYGVKWKKLVFGSPGP 318
P G+ G+ + G + PS DP P P + P GPP G++ G PGP
Sbjct: 507 PKGSRGSPGKPGPQGPSGDPGPPGPPGKEGLPGPQGPPGFQGLQGTVGEPGVPGP 561
>AB005145-1|BAB72147.1| 742|Homo sapiens collectin placenta 1
protein.
Length = 742
Score = 29.5 bits (63), Expect = 7.7
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 160 PHGTYGTKCR-GNRSPSADPEVPNDP*EWDYRHPNGPP-LYGVKWKKLVFGSPGP 318
P G+ G+ + G + PS DP P P + P GPP G++ G PGP
Sbjct: 507 PKGSRGSPGKPGPQGPSGDPGPPGPPGKEGLPGPQGPPGFQGLQGTVGEPGVPGP 561
>AB002345-1|BAA20804.2| 1281|Homo sapiens KIAA0347 protein protein.
Length = 1281
Score = 29.5 bits (63), Expect = 7.7
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +3
Query: 135 ISNNSSEHSPWNIRYKMQREPKSLR-RPRGSKRSVRMGLSTSERPSSIWSQMEEAGIWEP 311
+ N S SPW K R+ KS R +PR S S G S RP + A W P
Sbjct: 804 LRNTSGIDSPWKKTGK-NRKLKSKRVKPRDSSESTGSGGPVSARPPLVGL---NATAWSP 859
Query: 312 RPIDGSSTP 338
SS P
Sbjct: 860 SDTSQSSCP 868
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,959,797
Number of Sequences: 237096
Number of extensions: 2402352
Number of successful extensions: 5977
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 5571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5975
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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