Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0639
         (481 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    24   0.84 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    24   0.84 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   1.9  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   2.6  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 0.84
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 113 EWFRLQYPVYR*N 151
           EW RL YP+Y+ N
Sbjct: 68  EWGRLYYPIYKLN 80


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 0.84
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 113 EWFRLQYPVYR*N 151
           EW RL YP+Y+ N
Sbjct: 68  EWGRLYYPIYKLN 80


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory
          receptor candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 29 GTYPTHLETFGTC 67
          G YP++L+T G C
Sbjct: 21 GLYPSYLQTVGKC 33


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = -3

Query: 386 IGLELCINIIHHRFETVFFIXLVTCN 309
           + L +C N   + F  +FF   + C+
Sbjct: 58  VTLHVCFNSYMYAFTHIFFFFAICCD 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,837
Number of Sequences: 336
Number of extensions: 2351
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)