Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0639
(481 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 77 1e-15
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 66 2e-12
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 56 2e-09
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 52 3e-08
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 44 1e-05
SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces po... 37 0.001
SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non ca... 31 0.090
SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pom... 30 0.16
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 29 0.28
SPBC582.10c |||ATP-dependent DNA helicase Rhp16b |Schizosaccharo... 28 0.84
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 27 1.9
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 27 1.9
SPAC19E9.02 |fin1||serine/threonine protein kinase Fin1|Schizosa... 27 1.9
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 26 2.6
SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyc... 26 3.4
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 26 3.4
SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomy... 26 3.4
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 25 4.5
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 25 4.5
SPAC3F10.10c |map3||pheromone M-factor receptor |Schizosaccharom... 25 7.8
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 25 7.8
SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces pom... 25 7.8
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 25 7.8
SPAC13G7.09c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 7.8
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 77.4 bits (182), Expect = 1e-15
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 5/145 (3%)
Frame = +3
Query: 54 LSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFESSPS--PHNL 227
L+ +VGFDS+ Q+ K I+ GF FN++ +G +G GKSTL+++LF+ + S +
Sbjct: 9 LNNYVGFDSITSQINRKLIRRGFQFNVMVVGPSGSGKSTLINTLFSAHLMDSKGRLDYQA 68
Query: 228 P---TVKLKAHTMSWRRAMSG*S*QSVTLSVTGDQXNKEYSFKAVVDYIDAQFQAYLQ*E 398
P T ++ + R + GDQ N + ++ ++ YI Q +YL+ E
Sbjct: 69 PYRQTTEIHVTSQVVRENRVQLQLNLIDTPGYGDQINNDKCWEPIIKYIRDQHSSYLRRE 128
Query: 399 LKIKHSLSNYHNNKLHVCLYFIYPT 473
L H + ++H CL+FI PT
Sbjct: 129 LN-SHREKRLQDTRVHCCLFFIRPT 152
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 66.5 bits (155), Expect = 2e-12
Identities = 45/150 (30%), Positives = 81/150 (54%), Gaps = 9/150 (6%)
Frame = +3
Query: 51 KLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNL- 227
+L+G+VGF SLP+Q + ++ GF FN+L +GE+G GKSTL+++L N + P+ +L
Sbjct: 71 QLNGYVGFASLPNQWHRRCVRQGFNFNVLVLGESGSGKSTLVNTLLNRDV-YPPTQKSLT 129
Query: 228 ------PTVKLKAHTMSWRRAMSG*S*QSVTLSVT--GDQXNKEYSFKAVVDYIDAQFQA 383
P + ++ + +G S Q + GD + ++ V+ I+ ++
Sbjct: 130 GDFGVNPEPTVMINSSAVEIVENGISLQLNVIDTPGFGDFIDNTDCWQPVLTDIEGRYDQ 189
Query: 384 YLQ*ELKIKHSLSNYHNNKLHVCLYFIYPT 473
YL EL+ + S + ++H C++FI PT
Sbjct: 190 YL--ELEKHNPRSTIQDPRVHACIFFIQPT 217
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 56.4 bits (130), Expect = 2e-09
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 7/145 (4%)
Frame = +3
Query: 66 VGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLK 245
VG LP+Q +NG F ++ GE+GLGK+T ++LF+T +S P + K
Sbjct: 9 VGIADLPNQRHKIVSRNGVAFTLMLCGESGLGKTTFCNTLFSTTIKSHMGPEKV-RAKHA 67
Query: 246 AHTMSWRRAMSG*S*QSVTLSVT-------GDQXNKEYSFKAVVDYIDAQFQAYLQ*ELK 404
T+ + ++ L +T GD N +++VV++I+ Q ++Y++ + +
Sbjct: 68 EKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINNSGCWESVVEFIEDQHESYMRQDQQ 127
Query: 405 IKHSLSNYHNNKLHVCLYFIYPTKS 479
+ ++H CLYF+ P ++
Sbjct: 128 PDRR--KIIDMRIHACLYFLRPVRN 150
Score = 26.2 bits (55), Expect = 2.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 239 VEGSHYELEESNVRLKLTICDTVSY 313
+E + ELEE N L+LT+ DT +
Sbjct: 73 IEITKAELEEKNFHLRLTVIDTPGF 97
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 52.4 bits (120), Expect = 3e-08
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 3/157 (1%)
Frame = +3
Query: 9 DVEPTKAEPTLRTLKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLF 188
D P ++ T ++G + Q S+ +NG N++ +GE+ LGK+T ++S
Sbjct: 80 DEVPNSNGKSIPTFHPCNNIGINDFNHQHYSRVCRNGIDINLIVVGESSLGKTTFVNSFL 139
Query: 189 NTNFESSPSPHNLPTVKLKAHTMSWRRAMSG*S*QSVTLSVT---GDQXNKEYSFKAVVD 359
+N + + V+ KA T+S G ++T+ T GD+ + ++ +
Sbjct: 140 QSNDTNFRPKKTMDFVEHKA-TLS-----DGDQKFNLTIVDTPGFGDKSDNSNCWRPIAT 193
Query: 360 YIDAQFQAYLQ*ELKIKHSLSNYHNNKLHVCLYFIYP 470
+ + AY Q E+K+ S ++++H CL+FI P
Sbjct: 194 NLLHRLNAYFQNEVKMDRETSEI-DSRIHGCLFFINP 229
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 44.0 bits (99), Expect = 1e-05
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 7/142 (4%)
Frame = +3
Query: 66 VGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLP-TVKL 242
+ DSLP + + + I+ G +G GK+T ++LF T+ + S T+
Sbjct: 11 LNLDSLPSKRENLIKRKECGLTIMLCGASGTGKTTFFNTLFATSLQPEKSYETAKETIAK 70
Query: 243 KAHTMSWRRAMSG*S*QSVTLSVT-----GDQXNKEYSFKAVVDYIDAQFQAYLQ*ELKI 407
K + +A+ + L+V GD + + V +Y+D Q + YL +
Sbjct: 71 KTLEVKKNKAVIEEDGFHINLTVLDTPGFGDFIDNTSCWNTVAEYLDEQHERYL---IHD 127
Query: 408 KHSLS-NYHNNKLHVCLYFIYP 470
++SL + ++HVCLYFI P
Sbjct: 128 QNSLRVPRKDTRVHVCLYFITP 149
>SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 37.1 bits (82), Expect = 0.001
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 315 GDQXNKEYSFKAVVDYIDAQFQAYLQ*ELKIKHSLSNYHNNKLHVCLYFIYP 470
GD+ + SF+ V Y+++QF L E KIK + S + + ++ LYFI P
Sbjct: 88 GDKIDNSASFEVVTHYLESQFDQALIEESKIKRN-SKFTDTRVDALLYFIAP 138
>SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non
catalytic subunit Arm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 811
Score = 31.1 bits (67), Expect = 0.090
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 42 RTLKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFESS 209
R LK+ G D LP V +S++N + L I T +G S + DS+ N +FE +
Sbjct: 573 RDLKVFADYGSDKLPT--VEESLRNSPKPDTLWIHLTVIGHSLVQDSIVNGDFEKA 626
>SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 762
Score = 30.3 bits (65), Expect = 0.16
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 117 GFVFNILCI-GETGLGKSTLMDSLFNTNFESSPSPHNLPTVK 239
GF ++++ + G GKSTL+++LF T+F + T K
Sbjct: 36 GFNYHVVAVLGSQSTGKSTLLNNLFGTSFSVMDASKRQQTTK 77
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 29.5 bits (63), Expect = 0.28
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 141 IGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLKAHTM 257
+G G GKSTL+ ++ + E+ PSP + T AH++
Sbjct: 476 VGHNGCGKSTLLRAIGDYKVENFPSPDEVKTC-FVAHSL 513
>SPBC582.10c |||ATP-dependent DNA helicase Rhp16b
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 27.9 bits (59), Expect = 0.84
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 352 WWIILMHNSRPISNKNSRSNIHC 420
WW I++ + I NK+S+S + C
Sbjct: 378 WWRIILDEAHTIKNKSSKSALAC 400
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 26.6 bits (56), Expect = 1.9
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 48 LKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFN 191
+ L GH+ + Q V ++I G +++ +G G GKS L+D + +
Sbjct: 550 IPLVGHMDEQTKLYQWVRQTIVLGEGNSVIIVGPRGSGKSVLVDDILS 597
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 26.6 bits (56), Expect = 1.9
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = +3
Query: 123 VFNILCIGETGLGKSTLMDSLFNTNF 200
+ ++ +GE+G+GK+++M+ N F
Sbjct: 8 LLKVIILGESGVGKTSIMNQYVNRKF 33
>SPAC19E9.02 |fin1||serine/threonine protein kinase
Fin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 26.6 bits (56), Expect = 1.9
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 75 DSLPDQLVSK-SIQNGFVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLK 245
+ LP++ VSK S+++ GE+ STL D+ + F PSP +L KL+
Sbjct: 518 EGLPNRKVSKLSVESDETAVSASSGESVPTDSTLTDTKSKSVFVHPPSPQSLYVEKLE 575
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 26.2 bits (55), Expect = 2.6
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +3
Query: 120 FVFNILCIGETGLGKSTLM 176
++F +L IG++G+GKS L+
Sbjct: 7 YLFKLLLIGDSGVGKSCLL 25
>SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1679
Score = 25.8 bits (54), Expect = 3.4
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +3
Query: 72 FDSLPDQLVSKSIQNGFVFNILCIGET--GLGKSTLM--DSLFNTN 197
FD LP + + +QN FVF+ I E GL S + +S+++TN
Sbjct: 429 FDYLPARFICLKVQNPFVFHHSFIEEAKKGLNLSQWVQYNSVYSTN 474
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 25.8 bits (54), Expect = 3.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 135 LCIGETGLGKSTLMDSLFNTNFESSPS 215
LC G G GKSTLM ++ N E P+
Sbjct: 465 LC-GPNGSGKSTLMRAIVNGQVEGFPT 490
>SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 874
Score = 25.8 bits (54), Expect = 3.4
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +1
Query: 343 SKRWWIILMHNSRPISN----KNSRSNIHCPIII 432
S W++L HNS SN KN + N+ P+ I
Sbjct: 784 SSECWLLLGHNSSVYSNWPISKNKKENMEEPVTI 817
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 25.4 bits (53), Expect = 4.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 3 AIDVEPTKAEPTLRTLKLSGHVGFDSLPDQLVSKSIQ 113
A D E K E L+ LKLS H L ++ S +I+
Sbjct: 532 AFDAESDKLERELQQLKLSSHNSMLQLDQRIQSINIE 568
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 25.4 bits (53), Expect = 4.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 84 PDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTN 197
P++LVS + N + GK+TL DSL +N
Sbjct: 6 PEKLVSLQKNQENIRNFTLLAHVDHGKTTLADSLLASN 43
>SPAC3F10.10c |map3||pheromone M-factor receptor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 365
Score = 24.6 bits (51), Expect = 7.8
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 384 YLQ*ELKIKHSLSNYHNNKLHVCLYFIYP 470
YL ++ H L Y N HVCL + P
Sbjct: 95 YLDTVIRRDHPLKRYENWIWHVCLSILLP 123
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 24.6 bits (51), Expect = 7.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 132 ILCIGETGLGKSTLMDSLFN 191
I+ +GETG GKST + N
Sbjct: 115 IVVVGETGSGKSTQIPQFLN 134
>SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 24.6 bits (51), Expect = 7.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 155 ASFTYTQDIEDETILYAFTDQLV 87
A Y ++I+D T L AF DQ+V
Sbjct: 89 ALLNYAKNIDDLTSLSAFMDQIV 111
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 24.6 bits (51), Expect = 7.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 90 QLVSKSIQNGFVFNILCIGETGLGKSTLMDS 182
QL+ +I +G+ +I G+TG GK+ M S
Sbjct: 558 QLIQSAI-DGYNVSIFAYGQTGSGKTYTMSS 587
>SPAC13G7.09c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 135
Score = 24.6 bits (51), Expect = 7.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 208 DDSKLVLNRESIKVDLPRPVSPIHRILKTKP 116
+D + R S ++D+PRP S R+ K P
Sbjct: 82 NDLNVSSERLSRRIDVPRPTSKKKRLYKETP 112
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,974,306
Number of Sequences: 5004
Number of extensions: 38054
Number of successful extensions: 137
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 184020746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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