Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0639
(481 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0682 - 12923103-12923747,12924607-12924870,12924953-129252... 32 0.28
05_07_0003 + 26981956-26982190,26982258-26982318,26982739-269828... 31 0.37
01_06_0365 + 28767538-28767696,28768299-28768520,28768630-287688... 30 0.85
01_06_0371 + 28819035-28819322,28820541-28820595,28821179-288213... 30 1.1
06_01_0102 + 834660-834911,835460-835568,835891-836006,836116-83... 29 1.5
03_06_0579 + 34870958-34874578 29 1.5
01_06_0366 - 28779899-28780543,28780813-28781076,28781165-287814... 29 2.0
11_06_0197 + 21149453-21149630,21149930-21149996,21150142-211502... 28 3.4
11_03_0052 + 9330778-9330816,9330963-9331174,9331498-9333634 28 4.5
10_08_0842 - 20954712-20957738 28 4.5
03_06_0637 - 35219212-35219754,35220405-35220587 28 4.5
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 28 4.5
05_04_0226 + 19215091-19215172,19215281-19215394,19215508-192155... 27 6.0
05_01_0372 - 2913518-2916562,2916674-2917528 27 6.0
12_02_1032 + 25542420-25542573,25543511-25543577,25543816-255439... 27 7.9
12_01_0610 + 5030130-5030247,5030957-5033193 27 7.9
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119... 27 7.9
11_06_0236 + 21597601-21598415,21599223-21601152,21601361-21601510 27 7.9
11_06_0072 + 19813912-19815234,19815314-19815661,19816002-19816229 27 7.9
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 27 7.9
09_02_0464 - 9591139-9591571,9592601-9592818 27 7.9
06_03_0473 + 21190878-21191188,21191269-21192355,21192972-211931... 27 7.9
06_03_0414 - 20548577-20549006,20553521-20553744 27 7.9
05_07_0127 - 27872803-27873238,27873842-27874059 27 7.9
05_06_0082 - 25425050-25425479,25426551-25426783 27 7.9
05_01_0036 + 253734-253904,255216-255707 27 7.9
02_02_0351 + 9257204-9261388 27 7.9
01_05_0215 + 19374279-19374327,19374629-19374633,19376902-193769... 27 7.9
>02_02_0682 -
12923103-12923747,12924607-12924870,12924953-12925219,
12925301-12925529,12925614-12926295,12926409-12926682,
12926822-12927347,12927460-12927698,12927799-12927896,
12928017-12928020,12928657-12928832,12929593-12929647,
12930787-12931047
Length = 1239
Score = 31.9 bits (69), Expect = 0.28
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 63 HVGFDSLPDQLV----SKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLP 230
H + + P+QL+ S SI +G + +GE+G GKST++ SL ++ L
Sbjct: 333 HFSYPARPEQLIFTGFSISIPSGMTMAL--VGESGSGKSTVI-SLVERFYDPQSGEVLLD 389
Query: 231 TVKLKAHTMSWRRAMSG*S*QSVTLSVTGDQXNKEYSFK 347
V +K +S R G Q L T + N EY K
Sbjct: 390 GVNMKLLNLSRIRQKIGLVSQEPILFTTTIRENIEYGKK 428
>05_07_0003 +
26981956-26982190,26982258-26982318,26982739-26982833,
26983304-26983479,26983738-26983959,26984041-26984279,
26984786-26985311,26985407-26985680,26985759-26986410,
26986508-26986736,26986841-26987107,26987180-26987443,
26987526-26988194
Length = 1302
Score = 31.5 bits (68), Expect = 0.37
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +3
Query: 63 HVGFDSLPDQLV----SKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLP 230
+ + S PDQL+ S + NG I +GE+G GKST++ +L ++ +
Sbjct: 398 YFSYPSRPDQLIFDGFSLHVLNGITMAI--VGESGSGKSTVI-NLVERFYDPQAGEVLID 454
Query: 231 TVKLKAHTMSWRRAMSG*S*QSVTLSVTGDQXNKEY 338
V +K + W R G Q L T + N Y
Sbjct: 455 GVNIKTLRLRWIREKIGLVSQEPLLFATSIRENIVY 490
>01_06_0365 + 28767538-28767696,28768299-28768520,28768630-28768868,
28769499-28770024,28770115-28770388,28770495-28771134,
28771220-28771448,28771682-28771948,28772031-28772294,
28772700-28773344
Length = 1154
Score = 30.3 bits (65), Expect = 0.85
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +3
Query: 45 TLKLSGHVGFD--SLPDQLVSKSIQNGFVFN--ILCIGETGLGKSTLMDSLFNTNFESSP 212
T++L+ HV F S PD V G + +GE+G GKST++ +L ++
Sbjct: 910 TIELN-HVNFKYPSRPDVQVLCDFTLGIPSGKTVALVGESGSGKSTVI-ALLERFYDPHS 967
Query: 213 SPHNLPTVKLKAHTMSWRRAMSG 281
+L V+LK +SW R G
Sbjct: 968 GTISLDRVELKNLKLSWLRDQMG 990
>01_06_0371 +
28819035-28819322,28820541-28820595,28821179-28821354,
28821481-28821702,28821796-28822034,28822107-28822632,
28822726-28822999,28823098-28823737,28823833-28824061,
28824299-28824565,28824700-28824963,28825045-28825689
Length = 1274
Score = 29.9 bits (64), Expect = 1.1
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = +3
Query: 63 HVGFDSLPDQLV----SKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLP 230
+ + + P+QL+ S + +G I +GE+G GKST++ SL ++ +
Sbjct: 382 YFSYPARPEQLIFDGFSLHVSSGTTMAI--VGESGSGKSTVI-SLVERFYDPQAGEVLID 438
Query: 231 TVKLKAHTMSWRRAMSG*S*QSVTLSVTGDQXNKEY 338
+ +K+ ++W R G Q L +T + N Y
Sbjct: 439 GINIKSLRLNWIRGKIGLVSQEPLLFMTSIKDNITY 474
>06_01_0102 +
834660-834911,835460-835568,835891-836006,836116-836235,
836398-836436,836678-836811,837035-837299,837615-837698,
837943-838003,838748-838810,839174-839216,839632-839711,
839831-840267
Length = 600
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 87 DQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLP 230
D+++ +N I IG TG+GKST+M+ L+ ++ S SP LP
Sbjct: 80 DKILPYLTENNDFMVIGVIGPTGVGKSTIMNELY--GYDGS-SPGMLP 124
>03_06_0579 + 34870958-34874578
Length = 1206
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 120 FVFNILCIGETGLGKSTLMDSLF 188
F N+L +G+TG+GKS ++S+F
Sbjct: 583 FSCNVLVLGKTGVGKSATINSIF 605
>01_06_0366 - 28779899-28780543,28780813-28781076,28781165-28781431,
28781546-28781774,28781868-28781985,28782229-28782486,
28782585-28782858,28782950-28783475,28784289-28784527,
28784626-28784847,28784912-28784914,28785124-28785299,
28786147-28786201,28786288-28786557
Length = 1181
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 132 ILCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLKAHTMSWRRAMSG 281
I +GE+G GKST++ +L ++ +L V++++ +SW R G
Sbjct: 969 IALVGESGSGKSTII-ALLERFYDPDSGNISLDGVEIRSLKVSWLRDQMG 1017
Score = 27.9 bits (59), Expect = 4.5
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +3
Query: 72 FDSLPDQLV--SKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLK 245
+ + P+QL+ S+Q + +GE+G GKST++ SL ++ + + +K
Sbjct: 380 YPARPEQLILDGLSLQVASGTTMAIVGESGSGKSTVI-SLVERFYDPQSGEVLIDGISIK 438
Query: 246 AHTMSWRRAMSG*S*QSVTLSVTGDQXNKEYSFK 347
+ W R G Q L + + N Y K
Sbjct: 439 KLRLDWIRGKIGLVSQEPLLFMASIKDNIIYGKK 472
>11_06_0197 +
21149453-21149630,21149930-21149996,21150142-21150244,
21150901-21150971,21151091-21151154,21151239-21151304,
21151416-21151463,21151544-21151606,21151680-21151736,
21151884-21151950,21151969-21152042,21152176-21152244,
21152323-21152414,21152782-21152860,21153233-21153398,
21153826-21153950,21154089-21154351,21154473-21154569,
21154659-21154820,21154904-21155008,21155935-21156180
Length = 753
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 141 IGETGLGKSTLMDSLFNTNF 200
+G G GKSTL++ LF T+F
Sbjct: 54 VGPQGSGKSTLLNQLFGTSF 73
>11_03_0052 + 9330778-9330816,9330963-9331174,9331498-9333634
Length = 795
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 132 ILCIGETGLGKSTLMDSLFN 191
I +GETG+GKSTLM ++ N
Sbjct: 117 ISILGETGIGKSTLMLTICN 136
>10_08_0842 - 20954712-20957738
Length = 1008
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 120 FVFNILCIGETGLGKSTLMDSLFN 191
F IL +G+TG+GKS ++S+F+
Sbjct: 382 FSCTILVLGKTGVGKSATINSIFD 405
>03_06_0637 - 35219212-35219754,35220405-35220587
Length = 241
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 120 FVFNILCIGETGLGKSTLMDSLFNTNF 200
++F I+ IG++G+GKS L+ +F
Sbjct: 17 YLFKIVLIGDSGVGKSNLLSRFTRNSF 43
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 120 FVFNILCIGETGLGKSTLMDSL 185
F NIL +G+ G+GKST+++S+
Sbjct: 4912 FSCNILVLGKIGVGKSTVINSI 4933
>05_04_0226 +
19215091-19215172,19215281-19215394,19215508-19215590,
19215682-19215820,19215862-19216191,19216414-19216693,
19216795-19216956,19217134-19217349,19217458-19217495,
19217597-19217760,19217833-19217946,19218042-19218083,
19218180-19218983
Length = 855
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 75 DSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSL 185
+SLP V +S+ +GF I G+TG GK+ M+ +
Sbjct: 255 ESLP---VVRSVMDGFNVCIFAYGQTGTGKTFTMEGI 288
>05_01_0372 - 2913518-2916562,2916674-2917528
Length = 1299
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 120 FVFNILCIGETGLGKSTLMDSLF 188
F NIL +G+ G+GKS ++S+F
Sbjct: 660 FSCNILVLGKIGVGKSATINSIF 682
>12_02_1032 +
25542420-25542573,25543511-25543577,25543816-25543918,
25544435-25544505,25544639-25544702,25545260-25545316,
25545435-25545593,25545967-25546035,25546111-25546202,
25546579-25546657,25546923-25547088,25547480-25547604,
25547737-25548078,25548271-25548432,25548520-25548624,
25548766-25548860,25548948-25549044,25549848-25550165,
25550228-25550296
Length = 797
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 141 IGETGLGKSTLMDSLFNTNF 200
+G GKSTL++ LF TNF
Sbjct: 46 MGPQSSGKSTLLNQLFGTNF 65
>12_01_0610 + 5030130-5030247,5030957-5033193
Length = 784
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +3
Query: 132 ILCIGETGLGKSTLMDSLFN 191
IL +G+TG+GKS ++S+F+
Sbjct: 162 ILLLGKTGVGKSATINSIFD 181
>11_06_0458 +
23808402-23808469,23808800-23809684,23810011-23811961,
23812210-23812285,23813064-23813072,23813243-23813335,
23813578-23813581,23813780-23814703,23814926-23815909,
23816073-23816118,23816376-23816951,23817253-23817798,
23817820-23818416
Length = 2252
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +3
Query: 51 KLSGHVGFDSLPDQLVSKSIQNGF--VFNILCIGETGLGKSTLMDSLF 188
+L VG D D+++ KS+ +G + + +G GLGKSTL + ++
Sbjct: 213 ELDALVGIDGPRDEII-KSLDDGEQRMKVVSIVGSGGLGKSTLANQVY 259
>11_06_0236 + 21597601-21598415,21599223-21601152,21601361-21601510
Length = 964
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = +3
Query: 18 PTKAEPTLRTL--KLSGHVGFDSLPDQLVSKSIQNGFVFNIL----CIGETGLGKSTLMD 179
PT +P + +L K + VG D + ++ + +L +G GLGK+TL
Sbjct: 148 PTVIDPRILSLYEKATNLVGIDKASNDIIKRLFVEDEASKMLKMVSIVGFGGLGKTTLAK 207
Query: 180 SLFNT 194
++F+T
Sbjct: 208 AVFDT 212
>11_06_0072 + 19813912-19815234,19815314-19815661,19816002-19816229
Length = 632
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 87 DQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFN 191
D L+ KS + +G+ G+GKSTL ++N
Sbjct: 195 DFLIKKSAFEASYMVLAIVGQGGMGKSTLAQYVYN 229
>10_08_0253 -
16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +3
Query: 132 ILCIGETGLGKSTLMDSL 185
+L +GETG GK+TL+ +L
Sbjct: 520 VLLVGETGTGKTTLVQNL 537
>09_02_0464 - 9591139-9591571,9592601-9592818
Length = 216
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 120 FVFNILCIGETGLGKSTLMDSLFNTNF 200
++F ++ IG++G+GKS L+ F
Sbjct: 11 YLFKVVLIGDSGVGKSNLLSRFTRNEF 37
>06_03_0473 + 21190878-21191188,21191269-21192355,21192972-21193194,
21193286-21193356,21193385-21193441,21193442-21194056,
21194168-21194237,21194470-21194745,21194916-21195130,
21195224-21195529,21195750-21195813,21195902-21196141,
21196306-21196415
Length = 1214
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 141 IGETGLGKSTLMDSLF 188
+G TG GKSTL+ SLF
Sbjct: 1002 VGRTGSGKSTLISSLF 1017
>06_03_0414 - 20548577-20549006,20553521-20553744
Length = 217
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 120 FVFNILCIGETGLGKSTLMDSLFNTNF 200
++F ++ IG++G+GKS L+ F
Sbjct: 13 YLFKVVLIGDSGVGKSNLLSRFTRNEF 39
>05_07_0127 - 27872803-27873238,27873842-27874059
Length = 217
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 120 FVFNILCIGETGLGKSTLMDSLFNTNF 200
++F ++ IG++G+GKS L+ F
Sbjct: 11 YLFKVVLIGDSGVGKSNLLSRFTRNEF 37
>05_06_0082 - 25425050-25425479,25426551-25426783
Length = 220
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 120 FVFNILCIGETGLGKSTLMDSLFNTNF 200
++F ++ IG++G+GKS L+ F
Sbjct: 16 YLFKVVLIGDSGVGKSNLLSRFTKNEF 42
>05_01_0036 + 253734-253904,255216-255707
Length = 220
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 120 FVFNILCIGETGLGKSTLMDSLFNTNF 200
++F ++ IG++G+GKS L+ F
Sbjct: 13 YLFKVVLIGDSGVGKSNLLSRFTRNEF 39
>02_02_0351 + 9257204-9261388
Length = 1394
Score = 27.1 bits (57), Expect = 7.9
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +3
Query: 18 PTKAEPTLRTL---KLSGHVG-FDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSL 185
P K PT T+ KL G F+ D + + +I + + I +G G+GK+T L
Sbjct: 202 PPKRPPTSSTITQDKLYGRENIFNQTLDAMTNFTIHSRTLSVIPIVGPGGIGKTTFAQYL 261
Query: 186 FN 191
+N
Sbjct: 262 YN 263
>01_05_0215 + 19374279-19374327,19374629-19374633,19376902-19376956,
19377159-19377334,19378020-19378241,19378334-19378572,
19379201-19379726,19379801-19380074,19380524-19381187,
19381604-19381832,19381924-19382190,19382308-19382496,
19382664-19383308
Length = 1179
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 141 IGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLKAHTMSWRRAMSG 281
+GE+G GKST++ SL +E V+L+ +SW R G
Sbjct: 970 VGESGSGKSTVI-SLLERFYEPDAGRILFDGVELETLKVSWLRLQIG 1015
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,522,015
Number of Sequences: 37544
Number of extensions: 232808
Number of successful extensions: 636
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 991020332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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