Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0639
(481 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical... 144 3e-35
AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical... 144 3e-35
AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical... 144 3e-35
Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical pr... 65 2e-11
AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signali... 34 0.061
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 31 0.33
AF016430-10|AAB65374.1| 467|Caenorhabditis elegans Hypothetical... 31 0.57
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 29 1.3
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 29 1.3
U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin iso... 29 2.3
AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical ... 29 2.3
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 28 4.0
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 28 4.0
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 28 4.0
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 27 5.3
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 27 5.3
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 27 5.3
AC024746-10|AAF60400.2| 483|Caenorhabditis elegans Hypothetical... 27 5.3
Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z66567-1|CAA91491.1| 887|Caenorhabditis elegans Hypothetical pr... 27 7.0
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 27 7.0
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 27 7.0
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 27 7.0
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 27 7.0
AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical ... 27 7.0
AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical ... 27 7.0
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 27 7.0
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 27 7.0
Z93396-5|CAB07714.1| 633|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 27 9.3
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 27 9.3
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 27 9.3
DQ645956-1|ABG36764.1| 624|Caenorhabditis elegans molting prote... 27 9.3
>AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical
protein Y50E8A.4c protein.
Length = 465
Score = 144 bits (349), Expect = 3e-35
Identities = 67/149 (44%), Positives = 100/149 (67%)
Frame = +3
Query: 27 AEPTLRTLKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFES 206
++ T R ++L+GHVGFDSLP QLV K+++ GF FN++C+GETG GK+TL++SLFN +
Sbjct: 67 SDHTGRLMQLNGHVGFDSLPHQLVKKAVEAGFQFNLMCVGETGTGKTTLIESLFNMKLDF 126
Query: 207 SPSPHNLPTVKLKAHTMSWRRAMSG*S*QSVTLSVTGDQXNKEYSFKAVVDYIDAQFQAY 386
P H L TV+L+ T + V + GDQ +K+ S K +VDY+++QF+ Y
Sbjct: 127 EPCNHELKTVELRTCTKDVAEGGIRVKLRLVETAGFGDQLDKDKSAKVIVDYLESQFETY 186
Query: 387 LQ*ELKIKHSLSNYHNNKLHVCLYFIYPT 473
LQ ELK + L ++++++H CLYFI PT
Sbjct: 187 LQEELKPRRMLQYFNDSRIHACLYFISPT 215
>AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical
protein Y50E8A.4b protein.
Length = 461
Score = 144 bits (349), Expect = 3e-35
Identities = 67/149 (44%), Positives = 100/149 (67%)
Frame = +3
Query: 27 AEPTLRTLKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFES 206
++ T R ++L+GHVGFDSLP QLV K+++ GF FN++C+GETG GK+TL++SLFN +
Sbjct: 67 SDHTGRLMQLNGHVGFDSLPHQLVKKAVEAGFQFNLMCVGETGTGKTTLIESLFNMKLDF 126
Query: 207 SPSPHNLPTVKLKAHTMSWRRAMSG*S*QSVTLSVTGDQXNKEYSFKAVVDYIDAQFQAY 386
P H L TV+L+ T + V + GDQ +K+ S K +VDY+++QF+ Y
Sbjct: 127 EPCNHELKTVELRTCTKDVAEGGIRVKLRLVETAGFGDQLDKDKSAKVIVDYLESQFETY 186
Query: 387 LQ*ELKIKHSLSNYHNNKLHVCLYFIYPT 473
LQ ELK + L ++++++H CLYFI PT
Sbjct: 187 LQEELKPRRMLQYFNDSRIHACLYFISPT 215
>AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical
protein Y50E8A.4a protein.
Length = 530
Score = 144 bits (349), Expect = 3e-35
Identities = 67/149 (44%), Positives = 100/149 (67%)
Frame = +3
Query: 27 AEPTLRTLKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFES 206
++ T R ++L+GHVGFDSLP QLV K+++ GF FN++C+GETG GK+TL++SLFN +
Sbjct: 136 SDHTGRLMQLNGHVGFDSLPHQLVKKAVEAGFQFNLMCVGETGTGKTTLIESLFNMKLDF 195
Query: 207 SPSPHNLPTVKLKAHTMSWRRAMSG*S*QSVTLSVTGDQXNKEYSFKAVVDYIDAQFQAY 386
P H L TV+L+ T + V + GDQ +K+ S K +VDY+++QF+ Y
Sbjct: 196 EPCNHELKTVELRTCTKDVAEGGIRVKLRLVETAGFGDQLDKDKSAKVIVDYLESQFETY 255
Query: 387 LQ*ELKIKHSLSNYHNNKLHVCLYFIYPT 473
LQ ELK + L ++++++H CLYFI PT
Sbjct: 256 LQEELKPRRMLQYFNDSRIHACLYFISPT 284
>Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical
protein W09C5.2 protein.
Length = 459
Score = 65.3 bits (152), Expect = 2e-11
Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 6/141 (4%)
Frame = +3
Query: 69 GFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLF-----NTNFESSPSPHNLP- 230
GF + P+Q+ ++++NGF F ++ +G +GLGKST +++LF N N + S H P
Sbjct: 29 GFANFPNQVFRRAVKNGFDFTLMVVGRSGLGKSTFINTLFLAEINNLNEKESAPTHPHPS 88
Query: 231 TVKLKAHTMSWRRAMSG*S*QSVTLSVTGDQXNKEYSFKAVVDYIDAQFQAYLQ*ELKIK 410
TV+++ + + V GD N ++ +V+Y++++F E +I
Sbjct: 89 TVRVEEKLVKLVENSVSLNLTLVDTPGFGDAVNNSKCWEPIVNYVESKFFEQFCEETRID 148
Query: 411 HSLSNYHNNKLHVCLYFIYPT 473
+ +H+CLYFI P+
Sbjct: 149 RG-EKIVDKCVHLCLYFIEPS 168
>AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signaling
pathway homologprotein 1 protein.
Length = 1451
Score = 33.9 bits (74), Expect = 0.061
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 18 PTKAEPTLRTLKLSGHVGFDSLPDQLVSKS--IQNGFVFNILCIGETGLGKSTLMDSLFN 191
P K T TL G VGFD+ + +G NI G +G+G+S++ S N
Sbjct: 674 PAKRRKTRETLSFLGDVGFDTWTGVTTGMGGRVGDGVTKNI-TRGLSGIGRSSMSSSTGN 732
Query: 192 TNFESSPS 215
TN E + S
Sbjct: 733 TNNEDANS 740
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.33
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +3
Query: 15 EPTKAEPT--LRTLKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLF 188
E T AEPT L +LS + F L D+ + I + ++ +G G GK++++ L
Sbjct: 333 ESTAAEPTAVLDQSQLSTRIAFSFLNDRKLH--IGDFIESRVVLLGLDGAGKTSIVRRLK 390
Query: 189 NTNFESSPSPHNLPTVKLKAHTMSWR 266
++ +PH PT+ T+ ++
Sbjct: 391 KVQMDTVMAPH--PTIGFNIETIHYK 414
>AF016430-10|AAB65374.1| 467|Caenorhabditis elegans Hypothetical
protein C05C8.7 protein.
Length = 467
Score = 30.7 bits (66), Expect = 0.57
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 364 LMHNSRPISNKNSRSNIHCPIIITTNCMSVCTSSIQQSH 480
L N P++N NS NIH P I+ MS+ T+ Q H
Sbjct: 67 LAKNPSPLTNNNSAKNIHLPFIM--KVMSIRTTLSLQVH 103
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Frame = +3
Query: 123 VFNILCIGETGLGKSTLM----DSLFNTNFESSPS-PHNLPTVKLK 245
+F +L IG++G+GK+ ++ D FNT F S+ + T++LK
Sbjct: 9 LFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELK 54
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Frame = +3
Query: 123 VFNILCIGETGLGKSTLM----DSLFNTNFESSPS-PHNLPTVKLK 245
+F +L IG++G+GK+ ++ D FNT F S+ + T++LK
Sbjct: 9 LFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELK 54
>U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin
isoform 3 protein.
Length = 173
Score = 28.7 bits (61), Expect = 2.3
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 51 KLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKS 167
K SG + + L D +V K+ N F LC GE G+GKS
Sbjct: 15 KASGRIVME-LYDDVVPKTAGN---FRALCTGENGIGKS 49
>AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical
protein Y75B12B.5 protein.
Length = 173
Score = 28.7 bits (61), Expect = 2.3
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 51 KLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKS 167
K SG + + L D +V K+ N F LC GE G+GKS
Sbjct: 15 KASGRIVME-LYDDVVPKTAGN---FRALCTGENGIGKS 49
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 27.9 bits (59), Expect = 4.0
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 99 SKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNF 200
S+ + ++F ++ IG++G+GKS L+ F
Sbjct: 3 SRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEF 36
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 27.9 bits (59), Expect = 4.0
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 99 SKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNF 200
S+ + ++F ++ IG++G+GKS L+ F
Sbjct: 3 SRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEF 36
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 27.9 bits (59), Expect = 4.0
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 132 ILCIGETGLGKSTLMDSLFNTNFESSP 212
++ +GE+G GK+ L+ + FE+ P
Sbjct: 9 VVVVGESGAGKTALLTCFLDNTFETDP 35
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/30 (40%), Positives = 22/30 (73%), Gaps = 4/30 (13%)
Frame = +3
Query: 123 VFNILCIGETGLGKSTLM----DSLFNTNF 200
+F +L IG++G+GKS+L+ D+ F+ N+
Sbjct: 10 LFKLLIIGDSGVGKSSLLLRFADNTFSENY 39
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/30 (40%), Positives = 22/30 (73%), Gaps = 4/30 (13%)
Frame = +3
Query: 123 VFNILCIGETGLGKSTLM----DSLFNTNF 200
+F +L IG++G+GKS+L+ D+ F+ N+
Sbjct: 10 LFKLLIIGDSGVGKSSLLLRFADNTFSENY 39
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 27.5 bits (58), Expect = 5.3
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +3
Query: 126 FNILCIGETGLGKSTLMDSLFNTNFESS 209
+ I +G+TG GKS+L+ L + ++++
Sbjct: 238 YKIYVVGDTGTGKSSLISQLITSEYKNA 265
>AC024746-10|AAF60400.2| 483|Caenorhabditis elegans Hypothetical
protein Y110A2AL.2 protein.
Length = 483
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 5 DRC*AN*SGTYPTHLETFGTCWF 73
DR +N S PT TFG CWF
Sbjct: 60 DRASSNKSCRGPTKAPTFGRCWF 82
>Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical
protein F16H6.1 protein.
Length = 555
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2
Query: 17 AN*SGTYPTHLETF 58
AN SGTYP H++TF
Sbjct: 509 ANISGTYPAHMKTF 522
>Z66567-1|CAA91491.1| 887|Caenorhabditis elegans Hypothetical
protein ZK455.1 protein.
Length = 887
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 75 DSLPDQLVSKSIQNGFVFNILCIGET 152
D P QL+ ++ NG VF ++C +T
Sbjct: 840 DLKPGQLIDVNVSNGSVFQVICRFDT 865
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 4/34 (11%)
Frame = +3
Query: 120 FVFNILCIGETGLGKSTLM----DSLFNTNFESS 209
++F +L IG++G+GK+ ++ D FN +F S+
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFIST 40
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 75 DSLPDQLVSKSIQNGFVFN--ILCIGETGLGKSTLM 176
+SLP + K++ + N ++ +GETG GK+T M
Sbjct: 538 ESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQM 573
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 75 DSLPDQLVSKSIQNGFVFN--ILCIGETGLGKSTLM 176
+SLP + K++ + N ++ +GETG GK+T M
Sbjct: 538 ESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQM 573
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 4/34 (11%)
Frame = +3
Query: 120 FVFNILCIGETGLGKSTLM----DSLFNTNFESS 209
++F +L IG++G+GK+ ++ D FN +F S+
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFIST 40
>AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical
protein T04C4.1b protein.
Length = 893
Score = 27.1 bits (57), Expect = 7.0
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -1
Query: 178 SIKVDLPRPVSPIHRILKTKPFCMLLLTSWSGRLSKPTCPESFKVR 41
S+ LPR SP H+I K + + + TS S + P P S K R
Sbjct: 283 SLHSSLPRAFSPPHKISKARRRQLAVTTSLSETSAFP-IPSSLKAR 327
>AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical
protein T04C4.1a protein.
Length = 955
Score = 27.1 bits (57), Expect = 7.0
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -1
Query: 178 SIKVDLPRPVSPIHRILKTKPFCMLLLTSWSGRLSKPTCPESFKVR 41
S+ LPR SP H+I K + + + TS S + P P S K R
Sbjct: 344 SLHSSLPRAFSPPHKISKARRRQLAVTTSLSETSAFP-IPSSLKAR 388
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 4/34 (11%)
Frame = +3
Query: 120 FVFNILCIGETGLGKSTLM----DSLFNTNFESS 209
++F +L IG++G+GK+ ++ D FN +F S+
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFIST 40
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 63 HVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHN 224
+V ++S ++LV + +G+ +L G+TG GK+ M T F+++ +P N
Sbjct: 62 YVVYESCVEKLVD-GLFDGYNATVLAYGQTGSGKTHTM----GTAFDAAVTPKN 110
>Z93396-5|CAB07714.1| 633|Caenorhabditis elegans Hypothetical
protein ZC15.7 protein.
Length = 633
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 373 NSRPISNKNSRSNIHCPIIITTNCMSVCTS 462
N+RP +KN R+ +H + ++ C++V S
Sbjct: 491 NTRPKCDKNGRTALHAAAVESSACINVLLS 520
>Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +3
Query: 63 HVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFN 191
+V ++S ++LV + +G+ +L G+TG GK+ M + F+
Sbjct: 58 YVVYESCVEKLVD-GLFDGYNATVLAYGQTGSGKTHTMGTAFD 99
>Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +3
Query: 63 HVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFN 191
+V ++S ++LV + +G+ +L G+TG GK+ M + F+
Sbjct: 58 YVVYESCVEKLVD-GLFDGYNATVLAYGQTGSGKTHTMGTAFD 99
>Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +3
Query: 63 HVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFN 191
+V ++S ++LV + +G+ +L G+TG GK+ M + F+
Sbjct: 58 YVVYESCVEKLVD-GLFDGYNATVLAYGQTGSGKTHTMGTAFD 99
>Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +3
Query: 63 HVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFN 191
+V ++S ++LV + +G+ +L G+TG GK+ M + F+
Sbjct: 58 YVVYESCVEKLVD-GLFDGYNATVLAYGQTGSGKTHTMGTAFD 99
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 120 FVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNL 227
++F + IG+ G+GKS L+ F + PH +
Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKF-MADCPHTI 44
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 120 FVFNILCIGETGLGKSTLMDSLFNTNFE 203
++F + IG+TG+GKS L+ + F+
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQ 32
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 120 FVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNL 227
++F + IG+ G+GKS L+ F + PH +
Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKF-MADCPHTI 44
>DQ645956-1|ABG36764.1| 624|Caenorhabditis elegans molting protein
MLT-4 protein.
Length = 624
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 373 NSRPISNKNSRSNIHCPIIITTNCMSVCTS 462
N+RP +KN R+ +H + ++ C++V S
Sbjct: 482 NTRPKCDKNGRTALHAAAVESSACINVLLS 511
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,942,574
Number of Sequences: 27780
Number of extensions: 212020
Number of successful extensions: 579
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -