Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0636
         (524 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    24   0.94 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   2.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   3.8  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   5.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   5.0  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 238 RWKILVGQYTYKI 276
           RW +++GQY Y+I
Sbjct: 692 RWTLILGQYDYEI 704


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 224 DYPLLGGKYSLDSTRTRSTIWRPKFR 301
           D  L+GGK+S D       +W  K R
Sbjct: 700 DLKLMGGKWSCDCDLGWVEVWERKRR 725


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 475 QLPPEKLKTPEGSP 516
           ++PPE + TPE  P
Sbjct: 390 EIPPEPVPTPEPQP 403


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 262 YTYKIYHLASK 294
           Y + +YHLASK
Sbjct: 286 YCFNLYHLASK 296


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 262 YTYKIYHLASK 294
           Y + +YHLASK
Sbjct: 286 YCFNLYHLASK 296


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,484
Number of Sequences: 336
Number of extensions: 2881
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)