Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0636
(524 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024814-2|AAK68521.2| 259|Caenorhabditis elegans Hypothetical ... 128 3e-30
AC025726-7|AAK73916.2| 272|Caenorhabditis elegans Hypothetical ... 93 1e-19
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p... 83 2e-16
Z74043-9|CAA98540.1| 524|Caenorhabditis elegans Hypothetical pr... 28 3.6
AF040997-1|AAB97173.1| 524|Caenorhabditis elegans importin alph... 28 3.6
Z92834-6|CAB07391.1| 312|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z92830-2|CAB07355.2| 330|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 27 6.2
>AC024814-2|AAK68521.2| 259|Caenorhabditis elegans Hypothetical
protein Y54F10AR.1 protein.
Length = 259
Score = 128 bits (308), Expect = 3e-30
Identities = 55/84 (65%), Positives = 66/84 (78%)
Frame = +1
Query: 256 GQYTYKIYHLASKVPAFIRLLAPKGSLEVHEEAWNAYPYCRTVLTNPGYMKENFVICIES 435
GQYT+KIYHL SKVPA +R +APKGSL +HEEAWNAYPYC+TV+TNP YMKENF + IE+
Sbjct: 49 GQYTHKIYHLQSKVPAILRKIAPKGSLAIHEEAWNAYPYCKTVVTNPDYMKENFYVKIET 108
Query: 436 LHLPDAGDQYNVHQLPPEKLKTPE 507
+HLPD G N H L ++L E
Sbjct: 109 IHLPDNGTTENAHGLKGDELAKRE 132
Score = 72.5 bits (170), Expect = 2e-13
Identities = 31/47 (65%), Positives = 40/47 (85%)
Frame = +2
Query: 113 LTVEEYQVAQLYCVAEVSKNETGGGEGIEVIKNEPFKDYPLLGGKYS 253
++VEEYQV QL+ VAE SK ETGGGEG+EV+KNEPF + PLL G+++
Sbjct: 1 MSVEEYQVGQLWSVAEASKAETGGGEGVEVLKNEPFDNVPLLNGQFT 47
>AC025726-7|AAK73916.2| 272|Caenorhabditis elegans Hypothetical
protein Y71G12B.17 protein.
Length = 272
Score = 92.7 bits (220), Expect = 1e-19
Identities = 40/71 (56%), Positives = 50/71 (70%)
Frame = +1
Query: 256 GQYTYKIYHLASKVPAFIRLLAPKGSLEVHEEAWNAYPYCRTVLTNPGYMKENFVICIES 435
G YT KIY L SK P ++ L P + ++EE+WNAYPYC+TVLTNPGYMK+NF IE+
Sbjct: 60 GTYTKKIYRLRSKAPWVLQKLLPPEAFVIYEESWNAYPYCKTVLTNPGYMKDNFHQIIET 119
Query: 436 LHLPDAGDQYN 468
+HL D G N
Sbjct: 120 IHLDDNGSSEN 130
Score = 66.9 bits (156), Expect = 8e-12
Identities = 36/83 (43%), Positives = 54/83 (65%)
Frame = +2
Query: 80 MIIKEYRVTLPLTVEEYQVAQLYCVAEVSKNETGGGEGIEVIKNEPFKDYPLLGGKYSLD 259
MI+KEYR+ LPLTV+E++ LY V+ S+NETGGGEG+E + E F L G+ ++
Sbjct: 1 MIVKEYRIPLPLTVDEFERGLLYAVSACSRNETGGGEGVEFLVQEDFTSNTLRPGQ-TVS 59
Query: 260 STRTRSTIWRPKFRPSSGYLLRK 328
T T+ I+R R + ++L+K
Sbjct: 60 GTYTKK-IYR--LRSKAPWVLQK 79
>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 82.6 bits (195), Expect = 2e-16
Identities = 36/75 (48%), Positives = 51/75 (68%)
Frame = +1
Query: 256 GQYTYKIYHLASKVPAFIRLLAPKGSLEVHEEAWNAYPYCRTVLTNPGYMKENFVICIES 435
GQYT+KIYH+ S++PA+IR + P +LE HEE+WNAYP +T + P M + F + +E+
Sbjct: 56 GQYTFKIYHIGSRIPAWIRTVLPTNALEAHEESWNAYPVTKTRYSTP--MMDRFSLEVET 113
Query: 436 LHLPDAGDQYNVHQL 480
L+ D G Q NV L
Sbjct: 114 LYFDDHGQQENVFNL 128
Score = 63.7 bits (148), Expect = 8e-11
Identities = 27/59 (45%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = +2
Query: 80 MIIKEYRVTLPLTVEEYQVAQLYCVAEVSKNETGGGE-GIEVIKNEPFKDYPLLGGKYS 253
M+IKEYR+ LP+TV+EY++AQLY + + S+ ++ G + G+E+I N+P+ D P G+Y+
Sbjct: 1 MLIKEYRILLPMTVQEYRIAQLYMIQKKSRLDSHGQDSGVEIISNKPYTDGPGGSGQYT 59
>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 82.6 bits (195), Expect = 2e-16
Identities = 36/75 (48%), Positives = 51/75 (68%)
Frame = +1
Query: 256 GQYTYKIYHLASKVPAFIRLLAPKGSLEVHEEAWNAYPYCRTVLTNPGYMKENFVICIES 435
GQYT+KIYH+ S++PA+IR + P +LE HEE+WNAYP +T + P M + F + +E+
Sbjct: 56 GQYTFKIYHIGSRIPAWIRTVLPTNALEAHEESWNAYPVTKTRYSTP--MMDRFSLEVET 113
Query: 436 LHLPDAGDQYNVHQL 480
L+ D G Q NV L
Sbjct: 114 LYFDDHGQQENVFNL 128
Score = 63.7 bits (148), Expect = 8e-11
Identities = 27/59 (45%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = +2
Query: 80 MIIKEYRVTLPLTVEEYQVAQLYCVAEVSKNETGGGE-GIEVIKNEPFKDYPLLGGKYS 253
M+IKEYR+ LP+TV+EY++AQLY + + S+ ++ G + G+E+I N+P+ D P G+Y+
Sbjct: 1 MLIKEYRILLPMTVQEYRIAQLYMIQKKSRLDSHGQDSGVEIISNKPYTDGPGGSGQYT 59
>Z74043-9|CAA98540.1| 524|Caenorhabditis elegans Hypothetical
protein T19B10.7 protein.
Length = 524
Score = 28.3 bits (60), Expect = 3.6
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +3
Query: 225 IIHCSVENTRWTVHVQDLPFGVQSSGLHQAT---CSERISRSTRRSVERLPVL*NSTDES 395
++H ++ NT WT+HV V+ LH+ + C+ IS++TR + R + + DE
Sbjct: 88 VLHENLNNTVWTIHVL-----VKVQILHKLSDVYCNRVISQTTRLLISRTLLKISGIDEV 142
Query: 396 RLHER 410
+ +ER
Sbjct: 143 K-YER 146
>AF040997-1|AAB97173.1| 524|Caenorhabditis elegans importin alpha 1
protein.
Length = 524
Score = 28.3 bits (60), Expect = 3.6
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +3
Query: 225 IIHCSVENTRWTVHVQDLPFGVQSSGLHQAT---CSERISRSTRRSVERLPVL*NSTDES 395
++H ++ NT WT+HV V+ LH+ + C+ IS++TR + R + + DE
Sbjct: 88 VLHENLNNTVWTIHVL-----VKVQILHKLSDVYCNRVISQTTRLLISRTLLKISGIDEV 142
Query: 396 RLHER 410
+ +ER
Sbjct: 143 K-YER 146
>Z92834-6|CAB07391.1| 312|Caenorhabditis elegans Hypothetical
protein F39B2.11 protein.
Length = 312
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +1
Query: 232 TARWKILVGQYTYKIYHLASKVPAFIRLLAPKGSLEVHEEAWNAYPYCRTVLTNPGYMKE 411
T W + Y +Y+L + +RLLA K E+ +EA+ A T L + +
Sbjct: 123 TQYWYASHLHFPYNLYYLEKRRKKALRLLAGKNDTEILKEAFMALNTLSTKLGDNKFFCG 182
Query: 412 NFVICIESL 438
N +++L
Sbjct: 183 NKPTSLDAL 191
>Z92830-2|CAB07355.2| 330|Caenorhabditis elegans Hypothetical
protein F11A5.2 protein.
Length = 330
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 83 IIKEYRVTLPLTVEEYQVAQLYCVAEVS 166
I+KE+ V PL+ + Y V+ L+C+ VS
Sbjct: 84 ILKEFNV--PLSFQSYMVSTLFCMVAVS 109
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
F36H2.3 protein.
Length = 1388
Score = 27.5 bits (58), Expect = 6.2
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = -2
Query: 481 AAGGHCIGPRRPVNAAILYI*RSFLSCNRDSSVLFYSTGRRSTLLRVLREILS-EQVA** 305
A G CIG P NA + Y D S++ +S G +TL + L+ +
Sbjct: 1183 AVGSQCIGVIVPTNAQVTY---------SDGSMVLHSAGTTATLTCLNSATLTGSSYSSC 1233
Query: 304 RPELWTPNGRSCT 266
+WTP SCT
Sbjct: 1234 SNGVWTPTLGSCT 1246
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,789,567
Number of Sequences: 27780
Number of extensions: 277981
Number of successful extensions: 633
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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