Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0635
         (631 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma j...    42   0.009
UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila m...    42   0.009
UniRef50_Q4YAZ4 Cluster: Putative uncharacterized protein; n=1; ...    41   0.028
UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1; Planta...    40   0.049
UniRef50_Q86SD1 Cluster: Calumenin homologue; n=2; Eukaryota|Rep...    37   0.46 
UniRef50_Q6L8J7 Cluster: Putative uncharacterized protein; n=1; ...    36   0.61 
UniRef50_A7TSK3 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  
UniRef50_Q8YEH6 Cluster: Molybdopterin biosynthesis enzyme; n=6;...    32   9.9  
UniRef50_Q4UFG8 Cluster: CDP-diacylglycerol-inositol 3-phosphati...    32   9.9  
UniRef50_Q8SQN1 Cluster: Putative RIBOSOMAL RNA METHYLTRANSFERAS...    32   9.9  

>UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma
          japonicum|Rep: SJCHGC09205 protein - Schistosoma
          japonicum (Blood fluke)
          Length = 215

 Score = 42.3 bits (95), Expect = 0.009
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = +3

Query: 18 STAXAAALELVDPPGCRNSA 77
          STA AAALELVDPPGCRNSA
Sbjct: 4  STAVAAALELVDPPGCRNSA 23


>UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila
          melanogaster|Rep: Elastin like protein - Drosophila
          melanogaster (Fruit fly)
          Length = 110

 Score = 42.3 bits (95), Expect = 0.009
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = +3

Query: 18 STAXAAALELVDPPGCRNSA 77
          STA AAALELVDPPGCRNSA
Sbjct: 3  STAVAAALELVDPPGCRNSA 22


>UniRef50_Q4YAZ4 Cluster: Putative uncharacterized protein; n=1;
          Plasmodium berghei|Rep: Putative uncharacterized
          protein - Plasmodium berghei
          Length = 89

 Score = 40.7 bits (91), Expect = 0.028
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = +3

Query: 18 STAXAAALELVDPPGCRNS 74
          STA AAALELVDPPGCRNS
Sbjct: 10 STAVAAALELVDPPGCRNS 28


>UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1;
          Plantago major|Rep: Plasma memebrane H+-ATPase -
          Plantago major (Common plantain)
          Length = 106

 Score = 39.9 bits (89), Expect = 0.049
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = +3

Query: 18 STAXAAALELVDPPGCRNSA 77
          S A AAALELVDPPGCRNSA
Sbjct: 4  SPAVAAALELVDPPGCRNSA 23


>UniRef50_Q86SD1 Cluster: Calumenin homologue; n=2; Eukaryota|Rep:
           Calumenin homologue - Ciona intestinalis (Transparent
           sea squirt)
          Length = 308

 Score = 36.7 bits (81), Expect = 0.46
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 18  STAXAAALELVDPPGCR 68
           STA AAALELVDPPGCR
Sbjct: 123 STAVAAALELVDPPGCR 139


>UniRef50_Q6L8J7 Cluster: Putative uncharacterized protein; n=1;
           Thermosynechococcus vulcanus|Rep: Putative
           uncharacterized protein - Synechococcus vulcanus
           (Thermosynechococcus vulcanus)
          Length = 89

 Score = 36.3 bits (80), Expect = 0.61
 Identities = 18/32 (56%), Positives = 22/32 (68%)
 Frame = -1

Query: 133 QLTWRDCQ*IFI*KKGSAAAEFLQPGGSTSSR 38
           Q+T  D   IF+ ++  A  EFLQPGGSTSSR
Sbjct: 48  QITASDAGTIFLVQRERAVLEFLQPGGSTSSR 79


>UniRef50_A7TSK3 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 603

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = -1

Query: 238 LWMSIKYMYVYNKNLTFISVIWYL*HKFFTNLSRDQLTWRDC 113
           L +++KY  + N N+   SV++YL +    N+  D +TW  C
Sbjct: 266 LRIALKYSSIQNGNIPSSSVLFYLKNMKQNNVDADHVTWATC 307


>UniRef50_Q8YEH6 Cluster: Molybdopterin biosynthesis enzyme; n=6;
           Brucellaceae|Rep: Molybdopterin biosynthesis enzyme -
           Brucella melitensis
          Length = 321

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 296 PRPPCVVTMSLTATPDGRYCTTVAGFQSMKFSWSRLMVA 412
           P P  +  ++L A+PDG +CT  AG  ++     R+ VA
Sbjct: 79  PGPATIGRVNLFASPDGVFCTDTAGIDAINMHDPRISVA 117


>UniRef50_Q4UFG8 Cluster: CDP-diacylglycerol-inositol
           3-phosphatidyltransferase, putative; n=2; Theileria|Rep:
           CDP-diacylglycerol-inositol 3-phosphatidyltransferase,
           putative - Theileria annulata
          Length = 220

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
 Frame = +1

Query: 247 NTLYLSYKYLPLAGFEPATPL--CSDHVTYRYT------RRPLLYDCCRFSVYEV 387
           N  +L+Y  LPLA F+  +PL   S H++Y +T           Y   R S+YEV
Sbjct: 156 NVRFLTYGSLPLAAFKAVSPLFSSSTHLSYTFTIVIFTNTAQFFYASKRLSIYEV 210


>UniRef50_Q8SQN1 Cluster: Putative RIBOSOMAL RNA METHYLTRANSFERASE;
           n=1; Encephalitozoon cuniculi|Rep: Putative RIBOSOMAL
           RNA METHYLTRANSFERASE - Encephalitozoon cuniculi
          Length = 237

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +3

Query: 447 YFLGLFQKYYISMNKIKNNKSLKLHENDKMRCFLICTKVDDHGT-PW*NDM 596
           Y  G F+K+Y  +  +K   S      D M CFL CT + D G  P+  DM
Sbjct: 163 YIAGHFRKFYGGVTLLKPKAS----RTDSMECFLYCTGMKDTGADPYEIDM 209


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,980,302
Number of Sequences: 1657284
Number of extensions: 11406606
Number of successful extensions: 24541
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 23667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24537
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)