Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0635
         (631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    24   0.91 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    24   0.91 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    24   0.91 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   4.9  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   6.4  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   6.4  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   6.4  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.5  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.5  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 168 RYQITDINVRFLLYTYIYLIDIHNA 242
           RY++ D+  R  +Y  I+ +++H A
Sbjct: 72  RYKLNDLEKRREVYESIFKVEVHEA 96


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 168 RYQITDINVRFLLYTYIYLIDIHNA 242
           RY++ D+  R  +Y  I+ +++H A
Sbjct: 232 RYKLNDLEKRREVYESIFKVEVHEA 256


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 168 RYQITDINVRFLLYTYIYLIDIHNA 242
           RY++ D+  R  +Y  I+ +++H A
Sbjct: 232 RYKLNDLEKRREVYESIFKVEVHEA 256


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 177 ITDINVRFLLYTYIYLIDI 233
           +T +++RF LYT +++  I
Sbjct: 18  VTPVSLRFKLYTIVHIFII 36


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = -1

Query: 322 HGHYTGGSRVRIPPKEDIYM-INIMYFPALWM 230
           +G +  G +  +PP   IY+      F A WM
Sbjct: 92  NGEWVPGGKAEVPPSNPIYIHPESPNFGAHWM 123


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = +1

Query: 328 YRYTRRPLLYDCCRFSVYEVFM 393
           Y   +   +Y+ CRFS+ + ++
Sbjct: 46  YHRVKEEPIYESCRFSINQPYL 67


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = +1

Query: 328 YRYTRRPLLYDCCRFSVYEVFM 393
           Y   +   +Y+ CRFS+ + ++
Sbjct: 46  YHRVKEEPIYESCRFSINQPYL 67


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = +1

Query: 328 YRYTRRPLLYDCCRFSVYEVFM 393
           Y   +   +Y+ CRFS+ + ++
Sbjct: 46  YHSVKEEPIYESCRFSINQPYL 67


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 337 TRRPLLYDCCRFSVYEVFMVAVDGRTD 417
           TRR +L     FS+ + F+   +  TD
Sbjct: 132 TRRKILTPAFHFSILQQFVAIFNEETD 158


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 337 TRRPLLYDCCRFSVYEVFMVAVDGRTD 417
           TRR +L     FS+ + F+   +  TD
Sbjct: 132 TRRKILTPAFHFSILQQFVAIFNEETD 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,610
Number of Sequences: 336
Number of extensions: 3131
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)