Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0635
         (631 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   3.2  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   5.7  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   5.7  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    22   5.7  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   7.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   9.9  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 82  AAAEFLQPGGSTSSR 38
           A  EFL PGGS   R
Sbjct: 66  AKCEFLNPGGSVKDR 80


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 629 CNKFCNMQVQ*HVVS 585
           C  FCN QVQ  V S
Sbjct: 69  CEGFCNSQVQPSVAS 83


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 629 CNKFCNMQVQ*HVVS 585
           C  FCN QVQ  V S
Sbjct: 69  CEGFCNSQVQPSVAS 83


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/23 (30%), Positives = 16/23 (69%)
 Frame = +3

Query: 465 QKYYISMNKIKNNKSLKLHENDK 533
           ++ Y S+N ++N+KS+   ++ K
Sbjct: 39  KRVYSSLNSLRNHKSIYHRQHSK 61


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 559 LVQIRKQRILSFSCNF 512
           L QIR+ R L  SC+F
Sbjct: 108 LTQIRRDRGLHVSCSF 123


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 517 CTKTIKCVVS*FVPKLM 567
           CT  ++CVV  FV  L+
Sbjct: 146 CTAVLRCVVPSFVKDLV 162


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 517 CTKTIKCVVS*FVPKLM 567
           CT  ++CVV  FV  L+
Sbjct: 146 CTAVLRCVVPSFVKDLV 162


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 543 NNAFYRFRATLEIY 502
           N  F+R+R T E+Y
Sbjct: 243 NTKFFRYRITPELY 256


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,192
Number of Sequences: 438
Number of extensions: 3657
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)