Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0634
         (438 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical pr...    48   4e-06
Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical pr...    43   8e-05
Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical p...    43   8e-05
AF040661-11|AAG24210.1|  211|Caenorhabditis elegans Hypothetical...    28   3.4  
AF016654-1|AAB66028.1|  731|Caenorhabditis elegans Hypothetical ...    27   4.5  
AF098985-7|AAC67417.1|  306|Caenorhabditis elegans Hypothetical ...    27   6.0  

>Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical
           protein C06A1.1 protein.
          Length = 809

 Score = 47.6 bits (108), Expect = 4e-06
 Identities = 30/57 (52%), Positives = 33/57 (57%)
 Frame = -3

Query: 391 DNDICKYEMFVQTLQQSLWFWNQFQIPNKRGSYRGHGYFSG*PAHVQEEGGDDDLYS 221
           DNDI KYEMF QTLQQS  F N F+ P   G  RG    S  P   Q+   DDDLY+
Sbjct: 760 DNDIRKYEMFAQTLQQSRGFGNNFKFP---GEQRGSDAPSA-PVPAQD---DDDLYN 809


>Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score = 43.2 bits (97), Expect = 8e-05
 Identities = 20/32 (62%), Positives = 22/32 (68%)
 Frame = -3

Query: 391 DNDICKYEMFVQTLQQSLWFWNQFQIPNKRGS 296
           DNDI KYEMF QTLQQS  F N F+ P +  S
Sbjct: 758 DNDIRKYEMFAQTLQQSRGFGNNFKFPGEAPS 789


>Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score = 43.2 bits (97), Expect = 8e-05
 Identities = 20/32 (62%), Positives = 22/32 (68%)
 Frame = -3

Query: 391 DNDICKYEMFVQTLQQSLWFWNQFQIPNKRGS 296
           DNDI KYEMF QTLQQS  F N F+ P +  S
Sbjct: 758 DNDIRKYEMFAQTLQQSRGFGNNFKFPGEAPS 789


>AF040661-11|AAG24210.1|  211|Caenorhabditis elegans Hypothetical
           protein W10G11.15 protein.
          Length = 211

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -1

Query: 375 SMRCLCRPCSRACGFGTNFRFPTNAGVTGGTG-ISAGDQPTSR 250
           + +CL +P S  C   T F + T+  VTG  G I  G+QP ++
Sbjct: 114 TQKCLKQPKSDTCSALTAFEY-TDGSVTGTDGFIFQGNQPDNK 155


>AF016654-1|AAB66028.1|  731|Caenorhabditis elegans Hypothetical
           protein C17A2.5 protein.
          Length = 731

 Score = 27.5 bits (58), Expect = 4.5
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -3

Query: 130 HHTNMAPGPGRFTYAIV 80
           +HT++ PGPG+F  A++
Sbjct: 491 NHTSLEPGPGKFKLAVI 507


>AF098985-7|AAC67417.1|  306|Caenorhabditis elegans Hypothetical
           protein C08G5.6 protein.
          Length = 306

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 2   FYLKLYIYISSRDAAVCLELHVRCLRHYRIREPAGARR 115
           FY  +Y    +   A+ LE+ +RC+R  + R  +G RR
Sbjct: 140 FYASIYGLFETLAGAIALEVTIRCIRETK-RIRSGRRR 176


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,318,666
Number of Sequences: 27780
Number of extensions: 257604
Number of successful extensions: 776
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)