BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0634
(438 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 27 0.12
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 25 0.37
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 1.1
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 1.5
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 2.6
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 3.4
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 4.5
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 4.5
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 4.5
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 4.5
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 5.9
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 5.9
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 5.9
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 5.9
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 5.9
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 5.9
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 5.9
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 5.9
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 5.9
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 7.9
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 7.9
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 7.9
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 7.9
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 7.9
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 7.9
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 7.9
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 7.9
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 26.6 bits (56), Expect = 0.12
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 390 IMTSASMRCLCRPCS 346
++T A + C+CRPC+
Sbjct: 105 VITKAPLECMCRPCT 119
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 25.0 bits (52), Expect = 0.37
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1
Query: 109 QAPCWCGGATRRTNRQDVSSGLSRWWRCPEV 201
Q W G N D + G R+WR P V
Sbjct: 258 QTKGWDGSNMVEGNESDHNDGRLRYWRTPSV 288
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 1.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 378 QMSLSRHRTAHKLHHLL 428
++ LSRH T+H+L LL
Sbjct: 1450 ELQLSRHATSHELKGLL 1466
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 1.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 378 QMSLSRHRTAHKLHHLL 428
++ LSRH T+H+L LL
Sbjct: 1446 ELQLSRHATSHELKGLL 1462
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.0 bits (47), Expect = 1.5
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2
Query: 209 RHSLTVQVVITPLLLDVGWSPAEIPVPPVTP 301
+HS + P + +G +P P PP TP
Sbjct: 443 QHSTPLAHSSYPAAIQIGHTPHHHPHPPETP 473
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.2 bits (45), Expect = 2.6
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -3
Query: 397 CLDNDICKYEMF 362
C D+DI KY+MF
Sbjct: 192 CTDSDIEKYKMF 203
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 3.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 325 QFQIPNKRGSYRGHGYFS 272
++ P+K +YR HGY S
Sbjct: 605 RYAAPHKAFTYRMHGYAS 622
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 4.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVPKP 337
+IPVP P + GN P+P
Sbjct: 117 QIPVPVPVPVYCGNFP--PRP 135
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 4.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVPKP 337
+IPVP P + GN P+P
Sbjct: 121 QIPVPVPVPVYCGNFP--PRP 139
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 4.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVPKP 337
+IPVP P + GN P+P
Sbjct: 121 QIPVPVPVPVYCGNFP--PRP 139
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.4 bits (43), Expect = 4.5
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVPKPQALL-QGLHKHLILADVI 388
+IP PP P L L P A+ Q L K DV+
Sbjct: 43 KIPGPPALPLIGNALDLFGSPDAMFSQVLKKAENFKDVV 81
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.0 bits (42), Expect = 5.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVPKP 337
+IPVP P + GN P+P
Sbjct: 115 QIPVPVPVPIYCGNFP--PRP 133
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.0 bits (42), Expect = 5.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVPKP 337
+IPVP P + GN P+P
Sbjct: 115 QIPVPVPVPIYCGNFP--PRP 133
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.0 bits (42), Expect = 5.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVPKP 337
+IPVP P + GN P+P
Sbjct: 126 QIPVPVPVPIYCGNFP--PRP 144
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 5.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVPKP 337
+IPVP P + GN P+P
Sbjct: 332 QIPVPVPVPIYCGNFP--PRP 350
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 5.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVPKP 337
+IPVP P + GN P+P
Sbjct: 343 QIPVPVPVPIYCGNFP--PRP 361
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.0 bits (42), Expect = 5.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVPKP 337
+IPVP P + GN P+P
Sbjct: 361 QIPVPVPVPIYCGNFP--PRP 379
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.0 bits (42), Expect = 5.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVPKP 337
+IPVP P + GN P+P
Sbjct: 335 QIPVPVPVPIYYGNFP--PRP 353
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.0 bits (42), Expect = 5.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVPKP 337
+IPVP P + GN P+P
Sbjct: 353 QIPVPVPVPIYCGNFP--PRP 371
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 5.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVPKP 337
+IPVP P + GN P+P
Sbjct: 363 QIPVPVPVPIYCGNFP--PRP 381
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 7.9
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVP 331
+IPVP P + GN P
Sbjct: 118 QIPVPVPVPIYCGNFPSRP 136
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 7.9
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVP 331
+IPVP P + GN P
Sbjct: 118 QIPVPVPVPIYCGNFPSRP 136
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 7.9
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVP 331
+IPVP P + GN P
Sbjct: 118 QIPVPVPVPIYCGNFPSRP 136
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 7.9
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVP 331
+IPVP P + GN P
Sbjct: 118 QIPVPVPVPIYCGNFPSRP 136
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 7.9
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVP 331
+IPVP P + GN P
Sbjct: 118 QIPVPVPVPIYCGNFPSRP 136
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 7.9
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVP 331
+IPVP P + GN P
Sbjct: 118 QIPVPVPVPIYCGNFPSRP 136
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 7.9
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVP 331
+IPVP P + GN P
Sbjct: 118 QIPVPVPVPIYCGNFPSRP 136
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 20.6 bits (41), Expect = 7.9
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 275 EIPVPPVTPAFVGNLKLVP 331
+IPVP P + GN P
Sbjct: 121 QIPVPVPVPIYCGNFPSRP 139
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,785
Number of Sequences: 438
Number of extensions: 3423
Number of successful extensions: 31
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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