Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0633
         (513 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   2.8  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   4.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   4.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.5  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   8.5  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 429 NKNRKKCYAIKLAEQKL 479
           N+N + C+++KL  +KL
Sbjct: 519 NQNSEMCFSLKLKNKKL 535


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = +1

Query: 55  NNKYNVDCKQYYSTNKYLIFTKISSYNF*DISHNSYTLKRQLLETFV 195
           ++ +  D +Q+Y T    IFT I       I  ++ T++     TF+
Sbjct: 59  SSSFEADLRQFYKTAYSAIFTVIDFSLCKAILVHAITIRSTFSWTFI 105


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = -3

Query: 100 YWCCSIVYNLHYIY 59
           ++C SI +N+H ++
Sbjct: 59  FYCVSITFNVHLLF 72


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 473 LFR*FYCIAFFSVFVYRKT*WV 408
           +++  Y I  F+ F Y +T W+
Sbjct: 73  IYKNTYLIILFADFAYLETTWI 94


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 473 LFR*FYCIAFFSVFVYRKT*WV 408
           +++  Y I  F+ F Y +T W+
Sbjct: 91  IYKNTYLIILFADFAYLETTWI 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,805
Number of Sequences: 336
Number of extensions: 2424
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)