Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0632
         (443 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          77   3e-16
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          77   3e-16
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          77   3e-16
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           71   2e-14
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    25   1.6  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   4.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   4.9  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 77.0 bits (181), Expect = 3e-16
 Identities = 34/37 (91%), Positives = 34/37 (91%)
 Frame = -3

Query: 396 VWIGGSILASLFTFQQMWILKQEYDEFGPSIVHRKCF 286
           VWIGGSILASL TFQQMWI KQEYDE GPSIVHRKCF
Sbjct: 340 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376



 Score = 29.1 bits (62), Expect = 0.074
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = -2

Query: 442 TMKIKIIVLPERKYS 398
           TMKIKII  PERKYS
Sbjct: 325 TMKIKIIAPPERKYS 339


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 77.0 bits (181), Expect = 3e-16
 Identities = 34/37 (91%), Positives = 34/37 (91%)
 Frame = -3

Query: 396 VWIGGSILASLFTFQQMWILKQEYDEFGPSIVHRKCF 286
           VWIGGSILASL TFQQMWI KQEYDE GPSIVHRKCF
Sbjct: 340 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376



 Score = 29.1 bits (62), Expect = 0.074
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = -2

Query: 442 TMKIKIIVLPERKYS 398
           TMKIKII  PERKYS
Sbjct: 325 TMKIKIIAPPERKYS 339


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 77.0 bits (181), Expect = 3e-16
 Identities = 34/37 (91%), Positives = 34/37 (91%)
 Frame = -3

Query: 396 VWIGGSILASLFTFQQMWILKQEYDEFGPSIVHRKCF 286
           VWIGGSILASL TFQQMWI KQEYDE GPSIVHRKCF
Sbjct: 340 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376



 Score = 29.1 bits (62), Expect = 0.074
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = -2

Query: 442 TMKIKIIVLPERKYS 398
           TMKIKII  PERKYS
Sbjct: 325 TMKIKIIAPPERKYS 339


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 70.5 bits (165), Expect = 2e-14
 Identities = 31/37 (83%), Positives = 31/37 (83%)
 Frame = -3

Query: 396 VWIGGSILASLFTFQQMWILKQEYDEFGPSIVHRKCF 286
           VWIGGSILASL TFQ MWI K EYDE GP IVHRKCF
Sbjct: 340 VWIGGSILASLSTFQTMWISKHEYDEGGPGIVHRKCF 376



 Score = 27.5 bits (58), Expect = 0.23
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -2

Query: 442 TMKIKIIVLPERKYS 398
           T+KIKII  PERKYS
Sbjct: 325 TIKIKIIAPPERKYS 339


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 273 VSLPPAAAAGCSIQACN 223
           V LPP   AGC+ Q C+
Sbjct: 165 VRLPPEDGAGCATQPCS 181


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 355  EGKKGGEDRSTNPY 396
            +GK+  EDR  NPY
Sbjct: 3046 QGKQDQEDRKVNPY 3059


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 355  EGKKGGEDRSTNPY 396
            +GK+  EDR  NPY
Sbjct: 3049 QGKQDQEDRKVNPY 3062


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 432,283
Number of Sequences: 2352
Number of extensions: 7757
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37418568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)