Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0630
(483 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g04620.1 68415.m00470 cation efflux family protein potential ... 30 0.71
At2g43120.1 68415.m05355 pirin, putative similar to SP|O00625 Pi... 30 0.94
At4g35900.1 68417.m05099 DNA-binding protein-related weak simila... 29 1.2
At2g36710.1 68415.m04504 pectinesterase family protein contains ... 25 2.1
At5g54390.1 68418.m06773 inositol monophosphatase family protein... 29 2.2
At5g13140.1 68418.m01505 expressed protein 29 2.2
At4g29560.1 68417.m04215 expressed protein 29 2.2
At1g19790.1 68414.m02475 lateral root primordium (LRP) protein-r... 28 2.9
At2g46800.2 68415.m05840 zinc transporter (ZAT) identical to zin... 28 3.8
At2g46800.1 68415.m05839 zinc transporter (ZAT) identical to zin... 28 3.8
At1g12380.1 68414.m01431 expressed protein 27 5.0
At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR... 27 6.6
At3g29060.1 68416.m03635 EXS family protein / ERD1/XPR1/SYG1 fam... 27 6.6
At2g27210.1 68415.m03270 kelch repeat-containing serine/threonin... 27 6.6
At1g08420.1 68414.m00931 kelch repeat-containing protein / serin... 27 6.6
At5g62470.2 68418.m07840 myb family transcription factor (MYB96)... 27 8.8
At5g62470.1 68418.m07839 myb family transcription factor (MYB96)... 27 8.8
At4g11400.1 68417.m01838 ARID/BRIGHT DNA-binding domain-containi... 27 8.8
At2g35650.1 68415.m04372 glycosyl transferase family 2 protein s... 27 8.8
At2g07710.1 68415.m00998 hypothetical protein 27 8.8
At1g80480.1 68414.m09427 PRLI-interacting factor L, putative sim... 27 8.8
>At2g04620.1 68415.m00470 cation efflux family protein potential
member of the cation diffusion facilitator (CDF) family,
or cation efflux (CE) family, see PMID:11500563
Length = 798
Score = 30.3 bits (65), Expect = 0.71
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = +1
Query: 91 HDEAPQVEAKYDHQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSH 255
H ++ + E + H HH H H+ SH+ + H H + + HSH
Sbjct: 573 HSDSHKHEEHHQHSDSHKHEEHHEHDHHHHSHSHKHEECNHNHD---HEHQSHSH 624
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/55 (23%), Positives = 23/55 (41%)
Frame = +1
Query: 91 HDEAPQVEAKYDHQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSH 255
H+E Q + H+ HHH H+H + + + EH + + H+H
Sbjct: 579 HEEHHQHSDSHKHEEHHEHDHHHHSHSHKHEECNHNHDHEHQSHSHNHEECNHNH 633
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Frame = +1
Query: 121 YDHQSLIGESGHHHQIEHE-HAKSHQSIKFEHFH----PVPVYVKKEHSH 255
+ H E H+H EH+ H+ +H+ H H KKEH H
Sbjct: 602 HSHSHKHEECNHNHDHEHQSHSHNHEECNHNHDHHSDHQPEKSEKKEHRH 651
>At2g43120.1 68415.m05355 pirin, putative similar to SP|O00625 Pirin
{Homo sapiens}; contains Pfam profile PF02678: Pirin
Length = 321
Score = 29.9 bits (64), Expect = 0.94
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 43 IFLGLIAAVTAFPGIIHDEAPQVEAKYDHQSLIGESGHHHQIEHEHAK-SHQSI 201
I+ G + +TA GIIH E P+ E Q I S + IE + + SH I
Sbjct: 116 IYAGDVQWMTAGRGIIHSEMPEEEVNKGLQLWINLSSNEKMIEPNYQELSHSDI 169
>At4g35900.1 68417.m05099 DNA-binding protein-related weak
similarity to DNA-binding factor gmlip15 [Zea mays]
GI:14289167
Length = 245
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/81 (20%), Positives = 37/81 (45%)
Frame = +1
Query: 238 KKEHSHFSSILLKRENQSKTSS*FILRLNTSTAVDLSSRGGPVPNSPYNESYYNSLAVIL 417
K + +H S K + +K SS ++S++ +S P+P+ +S +++
Sbjct: 6 KHQRNHRLSATNKNQTLTKVSSISSSSPSSSSSSSSTSSSSPLPSQ---DSQAQKRSLVT 62
Query: 418 QHHDWKNPDITQLNHLATHPP 480
W + ++ ++HL H P
Sbjct: 63 MEEVWNDINLASIHHLNRHSP 83
>At2g36710.1 68415.m04504 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 407
Score = 24.6 bits (51), Expect(2) = 2.1
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +1
Query: 154 HHHQIEHEHAKSHQSIK 204
HHH H H H+ IK
Sbjct: 56 HHHHHHHHHYHHHEPIK 72
Score = 22.6 bits (46), Expect(2) = 2.1
Identities = 8/27 (29%), Positives = 11/27 (40%)
Frame = +1
Query: 100 APQVEAKYDHQSLIGESGHHHQIEHEH 180
A + A + + G HHH H H
Sbjct: 35 ATTIGALAKYSTFFGHKHHHHHHHHHH 61
>At5g54390.1 68418.m06773 inositol monophosphatase family protein
similar to SP|Q42546 3'(2'),5'-bisphosphate nucleotidase
(EC 3.1.3.7) {Arabidopsis thaliana}; contains Pfam
profile PF00459: Inositol monophosphatase family;
supporting cDNA gi|1354509|gb|U55205.1|ATU55205
Length = 373
Score = 28.7 bits (61), Expect = 2.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 292 CSDFPFSRGCLRSGCAPSSRTQERGGSV 209
C ++P + CL +GC + +T+ GSV
Sbjct: 177 CPNYPVKKECLSNGCNQAMKTKAVAGSV 204
>At5g13140.1 68418.m01505 expressed protein
Length = 267
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 361 PVPNSPYNESYYNSLAVILQHHDWKNPDITQLNHLATHPP 480
P P+ P+ + + + L DWKNP +T + +L PP
Sbjct: 224 PFPSFPFPSLPFGNPNLALPAFDWKNP-VTWIPYLPRFPP 262
>At4g29560.1 68417.m04215 expressed protein
Length = 493
Score = 28.7 bits (61), Expect = 2.2
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -1
Query: 336 RRACVQSQDESA*GFALIFPFQEDA*EVAVLLLHVHRNGVEVFEL 202
RR C++ +S ALI P+ D AVLL +H NG E EL
Sbjct: 253 RRLCLEKGKDSLRVLALIEPWNADDETAAVLLSSLH-NGSEEEEL 296
>At1g19790.1 68414.m02475 lateral root primordium (LRP)
protein-related similar to lateral root primordium 1
(LRP1) [Arabidopsis thaliana] GI:882341; contains Pfam
profile PF05142: Domain of unknown function (DUF702)
Length = 345
Score = 28.3 bits (60), Expect = 2.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 76 FPGIIHDEAPQVEAKYDHQSLIGESGHHHQI 168
F GI++D+ P + SL GE+ H H +
Sbjct: 261 FKGILYDQGPSSDHHRYSSSLNGETSHQHHL 291
>At2g46800.2 68415.m05840 zinc transporter (ZAT) identical to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; member of the cation diffusion
facilitator (CDF) family, or cation efflux (CE) family,
PMID:11500563
Length = 398
Score = 27.9 bits (59), Expect = 3.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 121 YDHQSLIGESGHHHQIEHEHAKSH 192
++H + + HHH +HEH SH
Sbjct: 199 HNHSHGVTVTTHHHHHDHEHGHSH 222
>At2g46800.1 68415.m05839 zinc transporter (ZAT) identical to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; member of the cation diffusion
facilitator (CDF) family, or cation efflux (CE) family,
PMID:11500563
Length = 398
Score = 27.9 bits (59), Expect = 3.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 121 YDHQSLIGESGHHHQIEHEHAKSH 192
++H + + HHH +HEH SH
Sbjct: 199 HNHSHGVTVTTHHHHHDHEHGHSH 222
>At1g12380.1 68414.m01431 expressed protein
Length = 793
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/54 (22%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +1
Query: 37 YHIFLGLIAAVTAFPGIIHDEAPQVEAKYDH-----QSLIGESGHHHQIEHEHA 183
+++ ++++ A ++HD+A +V DH + ++G+ G +++E HA
Sbjct: 485 FNLLEDVLSSARAIQLVVHDDACKVVLMEDHMAREVREMVGDEGFWNEVEAVHA 538
>At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1353
Score = 27.1 bits (57), Expect = 6.6
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -2
Query: 371 LGTGPPLEDKSTAVLVFSLRMNQLEVLL*FS---LFKRMLEKWLCSFFTYTGTGWKCSNL 201
L G D+ V S + N+ +LL S +F RM K + S+FT+ TG +N+
Sbjct: 1128 LVNGTEQGDRGDVVTETSSKQNEDVILLQRSADSMFSRMSGKEMISYFTHRTTGTSLTNI 1187
>At3g29060.1 68416.m03635 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 794
Score = 27.1 bits (57), Expect = 6.6
Identities = 10/41 (24%), Positives = 18/41 (43%)
Frame = +1
Query: 58 IAAVTAFPGIIHDEAPQVEAKYDHQSLIGESGHHHQIEHEH 180
I+ AF G+ + + + + H + + HHH H H
Sbjct: 80 ISLYRAFSGLTNRASRSPKKSHKHHNPLSSKRHHHHHNHHH 120
>At2g27210.1 68415.m03270 kelch repeat-containing serine/threonine
phosphoesterase family protein similar to SP|P48482
Serine/threonine protein phosphatase PP1 isozyme 2 (EC
3.1.3.16) {Arabidopsis thaliana}; contains Pfam profile
PF00149: Calcineurin-like phosphoesterase
Length = 1006
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 117 RFDLGSFIMYYSRKSSHCGNESQEDMVLHLGR*ITVVP 4
RF G I +S +++CG + +L LGR + VVP
Sbjct: 916 RFAQGHLITLFSA-TNYCGTANNAGAILVLGRDLVVVP 952
>At1g08420.1 68414.m00931 kelch repeat-containing protein /
serine/threonine phosphoesterase family protein contains
Pfam profiles: PF00149 calcineurin-like phosphoesterase,
PF01344 kelch motif
Length = 1018
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 117 RFDLGSFIMYYSRKSSHCGNESQEDMVLHLGR*ITVVP 4
RF G I +S +++CG + +L LGR + VVP
Sbjct: 927 RFAQGHLITLFSA-TNYCGTANNAGAILVLGRDLVVVP 963
>At5g62470.2 68418.m07840 myb family transcription factor (MYB96)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 352
Score = 26.6 bits (56), Expect = 8.8
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +1
Query: 220 PVPVYVKKEHSHFSSILLKRENQSKTSS*FILRLNTSTAVDLSSRGGPVPNSPYNESYYN 399
P PV ++ +FSS LL R +SS +++T S+ P P+ Y S N
Sbjct: 184 PTPVITQQNIRNFSSALLDRCYDPSSSS------SSTTTTTTSNTTNPYPSGVYASSAEN 237
Query: 400 SLAVILQ 420
+A +LQ
Sbjct: 238 -IARLLQ 243
>At5g62470.1 68418.m07839 myb family transcription factor (MYB96)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 351
Score = 26.6 bits (56), Expect = 8.8
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +1
Query: 220 PVPVYVKKEHSHFSSILLKRENQSKTSS*FILRLNTSTAVDLSSRGGPVPNSPYNESYYN 399
P PV ++ +FSS LL R +SS +++T S+ P P+ Y S N
Sbjct: 183 PTPVITQQNIRNFSSALLDRCYDPSSSS------SSTTTTTTSNTTNPYPSGVYASSAEN 236
Query: 400 SLAVILQ 420
+A +LQ
Sbjct: 237 -IARLLQ 242
>At4g11400.1 68417.m01838 ARID/BRIGHT DNA-binding domain-containing
protein / ELM2 domain-containing protein / Myb-like
DNA-binding domain-containing protein similar to
BRG1-binding protein ELD/OSA1 [Homo sapiens]
GI:18568414; contains Pfam profiles PF01388: ARID/BRIGHT
DNA binding domain, PF01448: ELM2 domain, PF00249:
Myb-like DNA-binding domain
Length = 573
Score = 26.6 bits (56), Expect = 8.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 362 RYPIHPIMSHITIHWPSFY 418
RY HP H IH PS Y
Sbjct: 279 RYRYHPFRGHQNIHHPSMY 297
>At2g35650.1 68415.m04372 glycosyl transferase family 2 protein
similar to beta-(1-3)-glucosyl transferase GB:AAC62210
GI:3687658 from [Bradyrhizobium japonicum], cellulose
synthase from Agrobacterium tumeficiens [gi:710492] and
Agrobacterium radiobacter [gi:710493]; contains Pfam
glycosyl transferase, group 2 family protein domain
PF00535; identical to cDNA for partial mRNA for
glycosyltransferase (cslA07 gene) GI:28551963
Length = 556
Score = 26.6 bits (56), Expect = 8.8
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 220 PVPVYVKKEHSHFSSILLKRENQSKTSS*FILRLNTSTAVDLSSRGG 360
P+P++ + H+ FSS LL +Q+ +S + LN + D+ +R G
Sbjct: 3 PLPIFHRLPHATFSSFLLSL-SQAGSSKTSVAFLNAFKSEDIIARIG 48
>At2g07710.1 68415.m00998 hypothetical protein
Length = 150
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = +1
Query: 118 KYDHQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHFSSIL 270
KY Q L + H I H +S + + H H P H HFS L
Sbjct: 12 KYSPQPLQLITRPRHSIHHSTLRSSRRLTTSHNHSTP-RSSSSHHHFSPSL 61
>At1g80480.1 68414.m09427 PRLI-interacting factor L, putative
similar to PRLI-interacting factor L [Arabidopsis
thaliana] GI:11139268; contains Pfam profile PF02492:
Cobalamin synthesis protein/P47K
Length = 444
Score = 26.6 bits (56), Expect = 8.8
Identities = 10/37 (27%), Positives = 14/37 (37%)
Frame = +1
Query: 145 ESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSH 255
+ G HH +H+H H H H + H H
Sbjct: 307 DKGDHHDHDHDHHHDHNHDHDHHHHDGHDHHHHSHDH 343
Score = 26.6 bits (56), Expect = 8.8
Identities = 11/37 (29%), Positives = 14/37 (37%)
Frame = +1
Query: 91 HDEAPQVEAKYDHQSLIGESGHHHQIEHEHAKSHQSI 201
HD +DH G HHH +H H S+
Sbjct: 316 HDHHHDHNHDHDHHHHDGHDHHHHSHDHTHDPGVSSV 352
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,615,263
Number of Sequences: 28952
Number of extensions: 256056
Number of successful extensions: 948
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 829097472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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