Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0628
(450 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 125 1e-29
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 125 2e-29
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 125 2e-29
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 124 3e-29
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 124 3e-29
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 122 1e-28
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 122 2e-28
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 120 5e-28
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 109 1e-24
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 57 8e-09
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 55 2e-08
12_02_1282 + 27528159-27529148,27529549-27529614 50 1e-06
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 50 1e-06
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 47 8e-06
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 44 7e-05
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 39 0.002
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 33 0.080
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 31 0.57
04_01_0554 - 7139623-7140390 29 2.3
12_02_1197 + 26915933-26916298 28 4.0
08_01_0178 - 1509100-1511214 27 7.0
07_03_0463 - 18449908-18450171,18450718-18450810,18451170-184512... 27 7.0
03_05_1049 - 29956379-29956400,29957103-29957188,29957269-299574... 27 9.2
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 125 bits (302), Expect = 1e-29
Identities = 57/63 (90%), Positives = 60/63 (95%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
M KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHR
Sbjct: 312 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHR 371
Query: 268 KCF 260
KCF
Sbjct: 372 KCF 374
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 125 bits (301), Expect = 2e-29
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
M KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHR 374
Query: 268 KCF 260
KCF
Sbjct: 375 KCF 377
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 125 bits (301), Expect = 2e-29
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
M KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHR 374
Query: 268 KCF 260
KCF
Sbjct: 375 KCF 377
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 124 bits (300), Expect = 3e-29
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
M KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHR
Sbjct: 318 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPAIVHR 377
Query: 268 KCF 260
KCF
Sbjct: 378 KCF 380
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 124 bits (300), Expect = 3e-29
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
M KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374
Query: 268 KCF 260
KCF
Sbjct: 375 KCF 377
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 122 bits (294), Expect = 1e-28
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
M KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVH
Sbjct: 314 MSKEITALAPGSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPGIVHM 373
Query: 268 KCF 260
KCF
Sbjct: 374 KCF 376
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 122 bits (293), Expect = 2e-28
Identities = 54/63 (85%), Positives = 60/63 (95%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
M KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWIS+ EY+ESGP+IVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHR 374
Query: 268 KCF 260
KCF
Sbjct: 375 KCF 377
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 120 bits (289), Expect = 5e-28
Identities = 54/63 (85%), Positives = 58/63 (92%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
M KEIT+LAP +MK+K+IAPPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVH
Sbjct: 314 MSKEITSLAPSSMKVKVIAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPGIVHM 373
Query: 268 KCF 260
KCF
Sbjct: 374 KCF 376
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 109 bits (262), Expect = 1e-24
Identities = 56/77 (72%), Positives = 60/77 (77%), Gaps = 14/77 (18%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQ--------------QMWIS 311
M KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQ QMWIS
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNLTPTLYEVARMQMWIS 374
Query: 310 KQEYDESGPSIVHRKCF 260
K EYDESGP+IVHRKCF
Sbjct: 375 KGEYDESGPAIVHRKCF 391
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 56.8 bits (131), Expect = 8e-09
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Frame = -3
Query: 400 IIAPPE------RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 260
++ PPE +YS W+GG+ILA + Q ++K +YDE+GPSIVH+KCF
Sbjct: 346 LVKPPEYMPENLARYSAWLGGAILAKVVFPQNQHVTKGDYDETGPSIVHKKCF 398
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 55.2 bits (127), Expect = 2e-08
Identities = 25/52 (48%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQE 302
++KE+ + ++K++A ER++SVWIGGSILASL +FQQMW SK +
Sbjct: 418 LEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASLGSFQQMWFSKAD 469
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = -3
Query: 349 LASLSTFQQMWISKQEYDESGPSIVHRKCF 260
LA S +MWI+K EYDESGPSIVHRKCF
Sbjct: 322 LAPSSMKIKMWIAKAEYDESGPSIVHRKCF 351
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 49.6 bits (113), Expect = 1e-06
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
++KE+ L P ++KIIA + W GGS+LA F+ M I+K EY+E G R
Sbjct: 366 LEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRR 425
Query: 268 KCF 260
+ F
Sbjct: 426 RFF 428
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 46.8 bits (106), Expect = 8e-06
Identities = 18/45 (40%), Positives = 32/45 (71%)
Frame = -3
Query: 412 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 278
+++ +++ P ++Y+VW GGS+LAS + F + +K EY+E G SI
Sbjct: 418 IEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 462
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 43.6 bits (98), Expect = 7e-05
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = -3
Query: 412 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 278
+++ ++A P + Y+ W GGS+ AS F + +K+EY+E G SI
Sbjct: 385 VEVNVVAHPIQSYAAWFGGSVAASNPEFYESCHTKEEYEEHGASI 429
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Frame = -3
Query: 448 MQKEITALAPWTMK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKQEYDE----S 290
++KE+ L P + I++I PP S W G +++++STF + W I K+++ + +
Sbjct: 417 LEKELRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVSTFTEAWCIKKKQFRQKTRRN 476
Query: 289 GPSIVH 272
GPS V+
Sbjct: 477 GPSFVN 482
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 33.5 bits (73), Expect = 0.080
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
++ I P+ +K++ + W G + A+ S F + S +Y E G ++ HR
Sbjct: 642 LESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKFGRHTFSLADYREHGENLFHR 701
Query: 268 K 266
K
Sbjct: 702 K 702
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 30.7 bits (66), Expect = 0.57
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = -3
Query: 412 MKIKIIAPPERKYSVWIGGSILASL 338
++++I PP RK+ V++GG++LA +
Sbjct: 366 LRLRIEDPPRRKHMVYLGGAVLAGI 390
>04_01_0554 - 7139623-7140390
Length = 255
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = -2
Query: 389 SREEVLRMDRWIDPRLPLYLPTDVDLETGVRRVWPLHCTQEVLLNHR 249
S+ +V +++RWI+ + Y P ++++ GV L V+ +HR
Sbjct: 91 SQPDVRQIERWINRGVRFYRPVELEITIGVGYDLKLPILGAVVFSHR 137
>12_02_1197 + 26915933-26916298
Length = 121
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +2
Query: 251 GGLEALPVYNGGARLVVLLFRDPHLLEGREGGEDRSTDPYGVL 379
GG + L V GG R +LL +G D D YG+L
Sbjct: 3 GGEDVLVVAPGGGRDALLLVAQESAWRNSDGAGDGDDDDYGML 45
>08_01_0178 - 1509100-1511214
Length = 704
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = -3
Query: 424 APWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 284
A W + + P S + + A TF W+S QEYD+ P
Sbjct: 122 ARWRDTVAVPNPSPAPPSTFFPAGVPAPPPTFSPFWVS-QEYDDDEP 167
>07_03_0463 -
18449908-18450171,18450718-18450810,18451170-18451254,
18451607-18451705,18452099-18452238,18453036-18453482
Length = 375
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 159 ITIISYVQLN*RRLQA*IEQPAAGCWR 239
+T + +V L RLQ +E PAA CWR
Sbjct: 245 LTFVPFVVL---RLQKFLESPAATCWR 268
>03_05_1049 -
29956379-29956400,29957103-29957188,29957269-29957413,
29958518-29958813,29959242-29959253
Length = 186
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 372 PYGSVDRSSPPSLPSNRCGS 313
P+ V SSPP+LP +CG+
Sbjct: 72 PFVGVPPSSPPALPPIKCGA 91
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,928,912
Number of Sequences: 37544
Number of extensions: 238677
Number of successful extensions: 740
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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