Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0628
(450 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 132 9e-32
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 132 9e-32
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 132 9e-32
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 132 9e-32
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 132 9e-32
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 132 9e-32
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 132 9e-32
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 132 9e-32
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 132 9e-32
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 129 8e-31
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 128 2e-30
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 82 2e-16
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 67 6e-12
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 50 8e-07
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 50 8e-07
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 30 0.68
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 30 0.68
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 30 0.68
Z46828-5|CAA86861.3| 596|Caenorhabditis elegans Hypothetical pr... 27 8.3
AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical ... 27 8.3
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 132 bits (320), Expect = 9e-32
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
MQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR
Sbjct: 314 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 373
Query: 268 KCF 260
KCF
Sbjct: 374 KCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 132 bits (320), Expect = 9e-32
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
MQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR
Sbjct: 314 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 373
Query: 268 KCF 260
KCF
Sbjct: 374 KCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 132 bits (320), Expect = 9e-32
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
MQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR
Sbjct: 314 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 373
Query: 268 KCF 260
KCF
Sbjct: 374 KCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 132 bits (320), Expect = 9e-32
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
MQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR
Sbjct: 314 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 373
Query: 268 KCF 260
KCF
Sbjct: 374 KCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 132 bits (320), Expect = 9e-32
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
MQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR
Sbjct: 314 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 373
Query: 268 KCF 260
KCF
Sbjct: 374 KCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 132 bits (320), Expect = 9e-32
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
MQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR
Sbjct: 314 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 373
Query: 268 KCF 260
KCF
Sbjct: 374 KCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 132 bits (320), Expect = 9e-32
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
MQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR
Sbjct: 270 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 329
Query: 268 KCF 260
KCF
Sbjct: 330 KCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 132 bits (320), Expect = 9e-32
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
MQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR
Sbjct: 300 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 359
Query: 268 KCF 260
KCF
Sbjct: 360 KCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 132 bits (320), Expect = 9e-32
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
MQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR
Sbjct: 314 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 373
Query: 268 KCF 260
KCF
Sbjct: 374 KCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 129 bits (312), Expect = 8e-31
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
MQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR
Sbjct: 314 MQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 372
Query: 268 KCF 260
KCF
Sbjct: 373 KCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 128 bits (308), Expect = 2e-30
Identities = 60/63 (95%), Positives = 60/63 (95%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
MQKEI LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR
Sbjct: 313 MQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 372
Query: 268 KCF 260
KCF
Sbjct: 373 KCF 375
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 81.8 bits (193), Expect = 2e-16
Identities = 37/56 (66%), Positives = 43/56 (76%), Gaps = 3/56 (5%)
Frame = -3
Query: 421 PWTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 263
P T+K+++ A P ERKY WIGGSIL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 380 PPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 66.9 bits (156), Expect = 6e-12
Identities = 29/60 (48%), Positives = 42/60 (70%)
Frame = -3
Query: 439 EITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 260
E+ +AP KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 315 EMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 50.0 bits (114), Expect = 8e-07
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = -3
Query: 409 KIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 287
KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 341 KIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 50.0 bits (114), Expect = 8e-07
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = -3
Query: 427 LAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 278
L P + +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 365 LKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 30.3 bits (65), Expect = 0.68
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 365 PYGVLPLWRSNDLNLHCPWGESCD 436
P VLPL NDL+ WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 30.3 bits (65), Expect = 0.68
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 365 PYGVLPLWRSNDLNLHCPWGESCD 436
P VLPL NDL+ WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 30.3 bits (65), Expect = 0.68
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 365 PYGVLPLWRSNDLNLHCPWGESCD 436
P VLPL NDL+ WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z46828-5|CAA86861.3| 596|Caenorhabditis elegans Hypothetical
protein R03D7.8 protein.
Length = 596
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 365 PYGVLPLWRSNDLNLHCPWGESCDF 439
PYG LP W + +NL G DF
Sbjct: 551 PYGYLPCWNNRLINLWSAPGYGSDF 575
>AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical
protein Y73B3A.1 protein.
Length = 659
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +2
Query: 32 IRFSTYNHHS*DYKKSFGECSTGPAV 109
I F YN S K+ GECST PAV
Sbjct: 516 IAFVEYNSRS-SRKRKAGECSTPPAV 540
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,474,427
Number of Sequences: 27780
Number of extensions: 178497
Number of successful extensions: 468
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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