Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0628
(450 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 126 7e-30
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 124 2e-29
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 124 2e-29
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 124 2e-29
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 124 2e-29
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 124 2e-29
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 123 6e-29
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 123 6e-29
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 109 1e-24
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 109 1e-24
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 98 2e-21
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 82 2e-16
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 77 7e-15
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 58 4e-09
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 46 2e-05
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 43 1e-04
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 41 4e-04
At4g32620.1 68417.m04644 expressed protein predicted protein T10... 31 0.48
At1g69270.1 68414.m07941 leucine-rich repeat family protein / pr... 30 0.63
At1g22370.2 68414.m09509 UDP-glucoronosyl/UDP-glucosyl transfera... 29 1.5
At1g22370.1 68414.m09508 UDP-glucoronosyl/UDP-glucosyl transfera... 29 1.5
At4g00750.1 68417.m00102 dehydration-responsive family protein s... 29 1.9
At2g42760.1 68415.m05295 expressed protein 28 2.5
At4g30340.1 68417.m04312 diacylglycerol kinase family protein co... 28 3.4
At2g39440.1 68415.m04841 expressed protein 28 3.4
At2g18730.1 68415.m02181 diacylglycerol kinase, putative contain... 27 4.4
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 27 5.9
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 27 5.9
At5g43500.2 68418.m05318 expressed protein 27 7.7
At5g43500.1 68418.m05319 expressed protein 27 7.7
At5g24740.1 68418.m02920 expressed protein 27 7.7
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 126 bits (304), Expect = 7e-30
Identities = 57/63 (90%), Positives = 60/63 (95%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
M KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHR 374
Query: 268 KCF 260
KCF
Sbjct: 375 KCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 124 bits (300), Expect = 2e-29
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
M KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374
Query: 268 KCF 260
KCF
Sbjct: 375 KCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 124 bits (300), Expect = 2e-29
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
M KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374
Query: 268 KCF 260
KCF
Sbjct: 375 KCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 124 bits (300), Expect = 2e-29
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
M KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374
Query: 268 KCF 260
KCF
Sbjct: 375 KCF 377
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 124 bits (300), Expect = 2e-29
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
M KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374
Query: 268 KCF 260
KCF
Sbjct: 375 KCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 124 bits (300), Expect = 2e-29
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
M KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374
Query: 268 KCF 260
KCF
Sbjct: 375 KCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 123 bits (296), Expect = 6e-29
Identities = 55/63 (87%), Positives = 59/63 (93%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
M KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GP IVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHR 374
Query: 268 KCF 260
KCF
Sbjct: 375 KCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 123 bits (296), Expect = 6e-29
Identities = 55/63 (87%), Positives = 59/63 (93%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
M KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GP IVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHR 374
Query: 268 KCF 260
KCF
Sbjct: 375 KCF 377
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 109 bits (261), Expect = 1e-24
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
M KEI ALA M+IKI+APPERKYSVWIGGSILASLST++QMWI+K EY+E+GP+IVH
Sbjct: 267 MTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTYEQMWITKAEYEENGPAIVHT 326
Query: 268 KCF 260
KCF
Sbjct: 327 KCF 329
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 109 bits (261), Expect = 1e-24
Identities = 48/63 (76%), Positives = 55/63 (87%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
M KEI ALAP +MKIK++APPERKYSVW+GGSILASLS+F MWI+K EYDE G +IVHR
Sbjct: 316 MNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWITKAEYDEQGGAIVHR 375
Query: 268 KCF 260
KCF
Sbjct: 376 KCF 378
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 98.3 bits (234), Expect = 2e-21
Identities = 42/62 (67%), Positives = 51/62 (82%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
M KE+ AL P +MK+K++ PPE + SVWIGGSILASLSTF QMWI+K EY+E G +IVHR
Sbjct: 304 MTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWITKDEYEEHGAAIVHR 363
Query: 268 KC 263
KC
Sbjct: 364 KC 365
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 81.8 bits (193), Expect = 2e-16
Identities = 38/47 (80%), Positives = 43/47 (91%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 308
M KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVKIDQ 361
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 76.6 bits (180), Expect = 7e-15
Identities = 33/65 (50%), Positives = 48/65 (73%), Gaps = 3/65 (4%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAP---PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 278
++K++ +P + ++K++A ER++SVWIGGSILASL +FQQMW SK EY+E G S
Sbjct: 376 LEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASY 435
Query: 277 VHRKC 263
+ RKC
Sbjct: 436 IQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 57.6 bits (133), Expect = 4e-09
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 445 QKEITALAPWTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWISKQEYDESGP 284
QKE L ++ ++ PPE YS W+GG+ILA + Q ++K +YDE+GP
Sbjct: 297 QKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFPQNQHVTKADYDETGP 355
Query: 283 SIVHRKCF 260
S+VHRKCF
Sbjct: 356 SVVHRKCF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = -3
Query: 448 MQKEITALAPWTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 269
++ E+ L P +KI + VW GGS+LAS F+ M ++K EY+E G + R
Sbjct: 358 LEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGSARCRR 417
Query: 268 KCF 260
+ F
Sbjct: 418 RFF 420
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 42.7 bits (96), Expect = 1e-04
Identities = 16/45 (35%), Positives = 31/45 (68%)
Frame = -3
Query: 412 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 278
+++ +++ P ++++VW GGS+L+S F +K+EY+E G SI
Sbjct: 372 VEVNVVSHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 40.7 bits (91), Expect = 4e-04
Identities = 15/49 (30%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = -3
Query: 412 MKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESGPSIVHR 269
++++I PP RK+ V++GG++LA + + WI++++Y E G + +++
Sbjct: 337 LRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYMEEGINCLNK 385
>At4g32620.1 68417.m04644 expressed protein predicted protein
T10M13.8, Arabidopsis thaliana
Length = 1544
Score = 30.7 bits (66), Expect = 0.48
Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 353 RSTDPYGV--LPLWRSNDLNLHCPWGESCDFLL 445
+S DP GV LP+ S DL L CPW ES F L
Sbjct: 572 KSPDP-GVEFLPIEDSGDLELCCPWNESEQFEL 603
>At1g69270.1 68414.m07941 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 540
Score = 30.3 bits (65), Expect = 0.63
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 362 DPYGVLPLWRSNDLNLHCPW-GESCD 436
DP GVL W S+ + HC W G SC+
Sbjct: 45 DPNGVLSSWVSDSSSNHCSWYGVSCN 70
>At1g22370.2 68414.m09509 UDP-glucoronosyl/UDP-glucosyl transferase
family protein glycosyltransferase family
Length = 479
Score = 29.1 bits (62), Expect = 1.5
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = -2
Query: 332 LPTDVDLETGVRRVWPLHCTQEVLLNHRASLPPAARGRLLNSGL*SPL 189
LP D +ET RR+ C QE +L+H PA G L +SG S L
Sbjct: 340 LPPDFLIETANRRMLASWCPQEKVLSH-----PAVGGFLTHSGWNSTL 382
>At1g22370.1 68414.m09508 UDP-glucoronosyl/UDP-glucosyl transferase
family protein glycosyltransferase family
Length = 309
Score = 29.1 bits (62), Expect = 1.5
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = -2
Query: 332 LPTDVDLETGVRRVWPLHCTQEVLLNHRASLPPAARGRLLNSGL*SPL 189
LP D +ET RR+ C QE +L+H PA G L +SG S L
Sbjct: 170 LPPDFLIETANRRMLASWCPQEKVLSH-----PAVGGFLTHSGWNSTL 212
>At4g00750.1 68417.m00102 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -2
Query: 401 DHCSSREEVLRMDRWIDPRLPLYLPTDVDLETGVRRV 291
D C + +L MDR + P+ + + D+D+ T V+++
Sbjct: 555 DRCDMEDILLEMDRILRPKGSVIIRDDIDVLTKVKKI 591
>At2g42760.1 68415.m05295 expressed protein
Length = 267
Score = 28.3 bits (60), Expect = 2.5
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -2
Query: 440 GNHSSRPMDNED*DHCSSREEVLRMDRWIDPRLPL-YLPTDVDLETGVRRVW 288
GN ++RP +E DHC R+ ++ I R+P ++VDL+ + R+W
Sbjct: 207 GNRAARPYLSEAWDHCGGRKGKKQITPEIKWRVPAPAAASEVDLKDNL-RLW 257
>At4g30340.1 68417.m04312 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 374
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 365 PYGVLPLWRSNDLNLHCPWGESCDF 439
P GV+PL NDL+ WG S F
Sbjct: 192 PVGVIPLGTGNDLSRSFSWGGSFPF 216
>At2g39440.1 68415.m04841 expressed protein
Length = 773
Score = 27.9 bits (59), Expect = 3.4
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 311 RDP-HLLEGREGGEDRSTDPYGVLPLWRSNDLNLHCPWGESCD 436
R+P G E GEDR DP + + R NDL + + + D
Sbjct: 39 REPGEFAAGMEEGEDRPIDPISDIDITRINDLMFNSNFRAAAD 81
>At2g18730.1 68415.m02181 diacylglycerol kinase, putative contains
INTERPRO domain, IPR001206, DAG-kinase catalytic domain
Length = 488
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 365 PYGVLPLWRSNDLNLHCPWGESCDF 439
P GV+PL NDL+ WG S F
Sbjct: 189 PVGVIPLGTGNDLSRSFGWGGSFPF 213
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 27.1 bits (57), Expect = 5.9
Identities = 11/37 (29%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -3
Query: 406 IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKQEY 299
I++I PP + W G ++++LS F W I+++++
Sbjct: 427 IRVIPPPYGVDTSWHGAKLISNLSIFPGPWCITRKQF 463
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +2
Query: 356 STDPYGVLPLWRSNDLNLHCPW-GESCDFLLH 448
S DP GVL W HC W G +CD H
Sbjct: 42 SNDPLGVLSDWTIIGSLRHCNWTGITCDSTGH 73
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -3
Query: 385 ERKYSVWIGGSILASLSTFQQMWISKQEYDESG 287
E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 527 EPQFVTWKGGAILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -3
Query: 385 ERKYSVWIGGSILASLSTFQQMWISKQEYDESG 287
E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 539 EPQFVTWKGGAILGILDFGREAWIERHQWMVNG 571
>At5g24740.1 68418.m02920 expressed protein
Length = 3306
Score = 26.6 bits (56), Expect = 7.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 315 IHICWKVEREARIDPPIHTEYFLSGGAMILI 407
I + W +ERE ++ IHT+ SGG + +I
Sbjct: 3201 IDLVWNIEREIGLESVIHTD--CSGGVVRII 3229
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,046,700
Number of Sequences: 28952
Number of extensions: 170420
Number of successful extensions: 495
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 732537840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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