Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0627
         (530 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.73 
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   1.7  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.2  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   2.2  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   2.9  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   5.1  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   8.9  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   8.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 0.73
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 413  ERERAAPTLLSSTA*TPPRQKNLPAL 490
            ERE A P++ SST   PP+     +L
Sbjct: 1791 EREEAPPSVHSSTVVPPPQHSTTQSL 1816


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -2

Query: 253 LLCM-TLALSRPRPPHFRGMYNLITEDFGW 167
           +LC+ TLAL + + PHF    N I   F W
Sbjct: 8   VLCLATLALGQ-KDPHFAADRNSIVHLFEW 36


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -2

Query: 250 LCM-TLALSRPRPPHFRGMYNLITEDFGW 167
           LC+ TLAL + + PHF    N I   F W
Sbjct: 9   LCLATLALGQ-KDPHFAADRNSIVHLFEW 36


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 277 IFLEIAHPLLCMTLALSRPRPPHF 206
           IF   A PL+   LA    RPPHF
Sbjct: 195 IFPGGAPPLVSPFLAAMAHRPPHF 218


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 114 LDALDRKVRSIMTLHRMLHPKSSVMRLYIPRK 209
           L+A+D +         +L PK S+   ++PR+
Sbjct: 458 LEAVDTRKDMAFVSDLVLRPKGSIKVKFVPRR 489


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +3

Query: 114 LDALDRKVRSIMTLHRMLHPKSSVMRLYIPR 206
           L+A+D +         +L PK S+   ++PR
Sbjct: 458 LEAVDTRKDMAFVSDLVLRPKGSIKVKFVPR 488


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 152 GHN*ADFSIQGIQFGLS 102
           GHN  DF++Q I   LS
Sbjct: 68  GHNCLDFTVQNILTFLS 84


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1

Query: 94  SGGLRPNWMP 123
           SGG  P W+P
Sbjct: 207 SGGFLPKWLP 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,325
Number of Sequences: 336
Number of extensions: 3071
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)