Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0627
         (530 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    76   6e-16
Z69982-1|CAA93822.1|  143|Anopheles gambiae lectin protein.            24   2.8  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 76.2 bits (179), Expect = 6e-16
 Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 2/145 (1%)
 Frame = +3

Query: 81   TFGVLRWTQTELDALDRKVRSIMTLHRMLHPKSSVMRLYIPRKCGGRGLLNAKVMHNSGC 260
            +FGV++W+ T+L+AL+R +R + T H+M HPK+SV R+ +PRK GG G+++ + +  S  
Sbjct: 839  SFGVMKWSNTDLEALERTIRVVSTKHQMRHPKASVERVILPRKIGGVGIIDIQALCISQI 898

Query: 261  AISRNISYQGLTV*CT*RS-WNATKD*PH*P*PKTRWQSPAVLNTSDRK-AIWKGKELHR 434
               R+   +        R+ + A          +  +Q    + T D K A WK KELH 
Sbjct: 899  HQLRSYFVESQNRHELYRTVYKADHGLSALHLAQQDYQLNCNIKTVDGKGATWKQKELHG 958

Query: 435  HFFQALHEPHLDKKTSLHWLPFGDL 509
                 L+  H+DK +S  WL   DL
Sbjct: 959  THTHQLNLEHIDKVSSSTWLVRCDL 983


>Z69982-1|CAA93822.1|  143|Anopheles gambiae lectin protein.
          Length = 143

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 440 EVSVQLFPFPYGLTVRGIEYC 378
           +V++ + P  YG+ V G  YC
Sbjct: 95  DVTITVKPDSYGIAVNGAHYC 115


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,387
Number of Sequences: 2352
Number of extensions: 12520
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)