Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0627
         (530 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D86974-1|BAA13210.2|  884|Homo sapiens KIAA0220 protein.               30   5.8  
BC073943-1|AAH73943.1|  361|Homo sapiens DKFZp547E087 protein pr...    29   7.7  
AK128772-1|BAC87606.1|  834|Homo sapiens protein ( Homo sapiens ...    29   7.7  
AB209632-1|BAD92869.1|  854|Homo sapiens PI-3-kinase-related kin...    29   7.7  

>D86974-1|BAA13210.2|  884|Homo sapiens KIAA0220 protein.
          Length = 884

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +3

Query: 123 LDRKVRSIMTL--HRMLHPKSSVMRLYIPRKCGGR 221
           + R + SI +L  H  LHP+  ++  ++P  CGGR
Sbjct: 502 ISRHLPSISSLPFHPQLHPQQMIISRHLPSVCGGR 536



 Score = 29.5 bits (63), Expect = 7.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 141 SIMTLHRMLHPKSSVMRLYIPRKCGGR 221
           S +  H  LHP+  ++  ++P  CGGR
Sbjct: 468 SSLPFHPQLHPQQMIISRHLPSVCGGR 494



 Score = 29.5 bits (63), Expect = 7.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 141 SIMTLHRMLHPKSSVMRLYIPRKCGGR 221
           S +  H  LHP+  ++  ++P  CGGR
Sbjct: 552 SSLPFHPQLHPQQMIISRHLPSVCGGR 578


>BC073943-1|AAH73943.1|  361|Homo sapiens DKFZp547E087 protein
           protein.
          Length = 361

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 141 SIMTLHRMLHPKSSVMRLYIPRKCGGR 221
           S +  H  LHP+  ++  ++P  CGGR
Sbjct: 29  SSLPFHPQLHPQQMIISRHLPSVCGGR 55


>AK128772-1|BAC87606.1|  834|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45371 fis, clone BRHIP3017855, highly  similar
           to Homo sapiens nuclear pore complex interacting protein
           (NPIP). ).
          Length = 834

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 141 SIMTLHRMLHPKSSVMRLYIPRKCGGR 221
           S +  H  LHP+  ++  ++P  CGGR
Sbjct: 418 SSLPFHPQLHPQQMIISRHLPSVCGGR 444



 Score = 29.5 bits (63), Expect = 7.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 141 SIMTLHRMLHPKSSVMRLYIPRKCGGR 221
           S +  H  LHP+  ++  ++P  CGGR
Sbjct: 460 SSLPFHPQLHPQQMIISRHLPSVCGGR 486



 Score = 29.5 bits (63), Expect = 7.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 141 SIMTLHRMLHPKSSVMRLYIPRKCGGR 221
           S +  H  LHP+  ++  ++P  CGGR
Sbjct: 502 SSLPFHPQLHPQQMIISRHLPSVCGGR 528


>AB209632-1|BAD92869.1|  854|Homo sapiens PI-3-kinase-related kinase
           SMG-1 isoform 1homolog protein.
          Length = 854

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 141 SIMTLHRMLHPKSSVMRLYIPRKCGGR 221
           S +  H  LHP+  ++  ++P  CGGR
Sbjct: 438 SSLPFHPQLHPQQMIISRHLPSVCGGR 464



 Score = 29.5 bits (63), Expect = 7.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 141 SIMTLHRMLHPKSSVMRLYIPRKCGGR 221
           S +  H  LHP+  ++  ++P  CGGR
Sbjct: 480 SSLPFHPQLHPQQMIISRHLPSVCGGR 506



 Score = 29.5 bits (63), Expect = 7.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 141 SIMTLHRMLHPKSSVMRLYIPRKCGGR 221
           S +  H  LHP+  ++  ++P  CGGR
Sbjct: 522 SSLPFHPQLHPQQMIISRHLPSVCGGR 548



 Score = 29.5 bits (63), Expect = 7.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 141 SIMTLHRMLHPKSSVMRLYIPRKCGGR 221
           S +  H  LHP+  ++  ++P  CGGR
Sbjct: 564 SSLPFHPQLHPQQMIISRHLPSVCGGR 590


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,232,596
Number of Sequences: 237096
Number of extensions: 2015974
Number of successful extensions: 3737
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3737
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)