Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0623
         (544 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    28   0.17 
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   1.2  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    25   2.1  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   3.7  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 28.3 bits (60), Expect = 0.17
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -1

Query: 181  FFFYFLKGL*TMISII*SMFFYLKSKIFIAFNMTQQQYSSFTSHNK 44
            FFF+  K +  +     S F+YL S +   F++  +QY S+  H +
Sbjct: 920  FFFHLRKNMGGLKRF--STFYYLISSMETFFDLLDKQYDSYNKHQE 963


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +1

Query: 292 VSASAG-VYVDMFTRFQAGFLSAIV 363
           VSA  G VYV MFTRF     SA++
Sbjct: 546 VSAFEGSVYVRMFTRFTQEIFSALI 570


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = +1

Query: 223 SESTGTTSSSALKNVYATLMMTCVSASAGVYVDMFTRFQAG 345
           +EST T SSS L  V  TL     +A    + D    FQAG
Sbjct: 810 TESTATESSSTLSTVTTTLPPVVTTAR---FSDFNRWFQAG 847


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -3

Query: 539 VGAEQSSYYDNGSTTLTYSSRGPMLMPDVNPNPSR*PSRKL 417
           +GA  +   + G TT+  + + P     V P P R P R L
Sbjct: 54  IGATGAGAINIGGTTIPIAPKKPTRRAGVKPQPDR-PMRAL 93


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,606
Number of Sequences: 2352
Number of extensions: 11757
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)