Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0622
         (553 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    29   0.027
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    25   0.44 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.44 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.3  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.2  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 29.1 bits (62), Expect = 0.027
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -1

Query: 313 LILFIFNVAYKRTRKTFEII*RLIAKTHMAFVKVIFLLAYFYIFGNNTLNNCLC 152
           L+L       K T  TF  I     +T   F   IFL+  FY F  NT+++ LC
Sbjct: 386 LVLHTVKTVLKTTMSTFSDI--TFMRTVWKFFN-IFLITPFYNFNENTIHSKLC 436


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 16/66 (24%), Positives = 29/66 (43%)
 Frame = -1

Query: 322 FDLLILFIFNVAYKRTRKTFEII*RLIAKTHMAFVKVIFLLAYFYIFGNNTLNNCLCYEL 143
           F + +LF  N A+      F ++  L+ +      ++ F L +F   GN  L      + 
Sbjct: 153 FQMYVLFFVNFAF------FVVVKMLLVRYRNLTKQLRFKLRFFEKLGNRRLGFVQRLDQ 206

Query: 142 CKFDLC 125
            +FD+C
Sbjct: 207 IQFDIC 212


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 16/66 (24%), Positives = 29/66 (43%)
 Frame = -1

Query: 322 FDLLILFIFNVAYKRTRKTFEII*RLIAKTHMAFVKVIFLLAYFYIFGNNTLNNCLCYEL 143
           F + +LF  N A+      F ++  L+ +      ++ F L +F   GN  L      + 
Sbjct: 153 FQMYVLFFVNFAF------FVVVKMLLVRYRNLTKQLRFKLRFFEKLGNRRLGFVQRLDQ 206

Query: 142 CKFDLC 125
            +FD+C
Sbjct: 207 IQFDIC 212


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 192 KYASKKITFTKAICVFAINLYIISN 266
           KY    +TF   IC+F I + I  N
Sbjct: 21  KYLKVLVTFAHFICLFPITINIRKN 45


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 5/13 (38%), Positives = 8/13 (61%)
 Frame = -3

Query: 422 YWRIICCLERKVI 384
           YW  +CCL   ++
Sbjct: 56  YWLNVCCLNLSIV 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,291
Number of Sequences: 336
Number of extensions: 2564
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)