Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0622
         (553 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0245 - 1611135-1611557                                           32   0.35 
07_03_1575 - 27848977-27849095,27849254-27849302,27850270-278502...    29   1.9  
09_02_0548 - 10467342-10468810,10470309-10471632                       28   5.7  
06_03_1112 - 27706813-27707175,27707225-27707299,27707515-277076...    28   5.7  
10_08_0647 - 19576672-19577259                                         27   10.0 
10_08_0153 - 15240707-15241019,15241269-15241723                       27   10.0 

>02_01_0245 - 1611135-1611557
          Length = 140

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 291 TLKMKRINKSKPLVIIQCYEDRQPTLPLKKTDHLPFEATNDPPIPKREAT 440
           T+ +K +  S+P +  +  E+ + T P  +   LP EA   PP PK+  T
Sbjct: 46  TVSLKPVKVSRPQLGDEEEEEEEVTTPRGEECRLPAEAATCPPAPKKPRT 95


>07_03_1575 - 27848977-27849095,27849254-27849302,27850270-27850287,
            27850798-27851786,27852119-27852733,27852893-27852921,
            27853990-27854453,27854530-27854654,27854743-27855025,
            27855112-27856102,27856965-27857576,27857666-27858630
          Length = 1752

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +3

Query: 324  PLVIIQCYEDRQPTLPLKK--TDHLPFEATN-DPPIPKREATED 446
            PL +++ YE +  T  LKK   DHLP +  +  PP PK+   +D
Sbjct: 1081 PLSLLKAYEAKALTRLLKKKDIDHLPKKMIDLKPPKPKKSGFDD 1124


>09_02_0548 - 10467342-10468810,10470309-10471632
          Length = 930

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +1

Query: 307 ELTNRNLWSSSSVTKTDNLLCRSRKPITFRSRQQMILQYPNAKLQRIHHLHHR 465
           EL  +NL SS S+ +      R R+ IT   +Q  +L Y     Q + H HHR
Sbjct: 51  ELILQNLDSSLSLVRAAATCQRWRRVIT---QQSFVLDYDIPPHQIVGHYHHR 100


>06_03_1112 -
           27706813-27707175,27707225-27707299,27707515-27707665,
           27707953-27708190,27708280-27708490,27708565-27708680,
           27708805-27708847,27709817-27709859,27709941-27710056
          Length = 451

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 182 EDIKIREQKNYLHESHMCFRD*PLYNF 262
           ED  + E+ +  H+SH+ FRD   YNF
Sbjct: 299 EDQILLEKYHKCHDSHVLFRDKSCYNF 325


>10_08_0647 - 19576672-19577259
          Length = 195

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 445 SSVASRLGIGGSFVASNGR*SVFLSGKVG 359
           +SVA+ LG G  F A+NG  S  ++G +G
Sbjct: 146 NSVAAGLGTGALFRAANGPRSAAVAGAIG 174


>10_08_0153 - 15240707-15241019,15241269-15241723
          Length = 255

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 99  YCTGA*KIAFVNQPCWREGAVRNTIDG 19
           Y  G   + +    CWR+G VR T+ G
Sbjct: 141 YRAGIVPVLYQQVKCWRQGGVRFTVSG 167


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,850,639
Number of Sequences: 37544
Number of extensions: 262251
Number of successful extensions: 541
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)