Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0621
         (572 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   4.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   7.5  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.5  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   7.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.9  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.9  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 180 YYTLLYYSVV*KHLNN 133
           YY +LY+S +  H+N+
Sbjct: 331 YYNILYFSRIMFHINS 346


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 5/13 (38%), Positives = 8/13 (61%)
 Frame = +1

Query: 202  IVPHTLLWTRSHC 240
            + P+ L W + HC
Sbjct: 2264 VCPNGLFWNKDHC 2276


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -1

Query: 518 KQNNTHL*SHYPLNMSFQIYNCFLVFHLDISKYIFNTLLG 399
           KQ   +  S     M+F I+N ++V  L    Y++ + +G
Sbjct: 101 KQEIFNCCSKKSFRMNFAIFNLYMVLLLLFDAYLWISSVG 140


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -2

Query: 364 DVSFLTMLYYYVINYKASF 308
           DV F     YYV   KASF
Sbjct: 265 DVLFQAYYLYYVATGKASF 283


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -2

Query: 364 DVSFLTMLYYYVINYKASF 308
           DV F     YYV   KASF
Sbjct: 265 DVLFQAYYLYYVATGKASF 283


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 455 CFLVFHLDISKYIFNTLLGSGL 390
           C+L  HL  S  +FN + G  L
Sbjct: 227 CYLHQHLSKSVKLFNEVFGVSL 248


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 455 CFLVFHLDISKYIFNTLLGSGL 390
           C+L  HL  S  +FN + G  L
Sbjct: 245 CYLHQHLSKSVKLFNEVFGVSL 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,511
Number of Sequences: 336
Number of extensions: 2290
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)