Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0621
         (572 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   2.8  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   3.8  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   6.6  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   8.7  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 299 LYYSAI*YSSVYLVNIYSRIQCERVHNNV 213
           LYYS +   S+Y VN+   ++ +   NN+
Sbjct: 266 LYYSPLTSHSLYYVNMEPFMKSQYEENNI 294


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 299 LYYSAI*YSSVYLVNIYSRIQCERVHNNV 213
           LYYS +   S+Y VN    ++ E   NNV
Sbjct: 266 LYYSPLSSRSLYYVNTKPFMKSEYGANNV 294


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -1

Query: 317 SFFQTTLYYSAI*YSSVYLVNIYSRIQCERVHNNVWG 207
           S+F   +Y+ +I   S+   +   R  C R+ N + G
Sbjct: 453 SYFIEPIYFHSIVLGSLLNPSHMYRAVCGRIENTIQG 489


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 5/19 (26%), Positives = 12/19 (63%)
 Frame = -1

Query: 485 PLNMSFQIYNCFLVFHLDI 429
           P   ++Q+  C++ FH ++
Sbjct: 107 PCEKAYQLVKCYVEFHPEV 125


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,485
Number of Sequences: 438
Number of extensions: 2553
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)