Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0619
         (614 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         27   0.64 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   1.9  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    24   4.5  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 500  HGPPDPKWLLQPIDIYNLNDANYLET*VVLRSKFLQY 390
            H  P P  +LQ + + N ND   LE    +   FL+Y
Sbjct: 1659 HPGPSPAIILQALTMSNANDGINLERLETIGDSFLKY 1695


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 328 WWYLPMRTQKTSYHQ 284
           W+ LP + Q +SYHQ
Sbjct: 160 WYQLPQQQQPSSYHQ 174


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -1

Query: 497 GPPDPKWLLQPIDIYNLNDANYLET*VVLRSKFLQYNG 384
           GPP  K  +  + I+N+ +  Y +T V LR     Y G
Sbjct: 421 GPPPEKLCVDQL-IWNIRNIVYNQTSVTLRKHKAAYKG 457


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,475
Number of Sequences: 2352
Number of extensions: 10481
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)