Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0618
(549 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 184 5e-47
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 184 5e-47
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 184 5e-47
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 184 5e-47
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 184 5e-47
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 184 5e-47
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 184 5e-47
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 184 5e-47
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 184 5e-47
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 184 5e-47
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 180 8e-46
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 131 4e-31
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 131 4e-31
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 130 9e-31
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 130 9e-31
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 124 6e-29
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 99 1e-21
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 99 2e-21
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 73 1e-13
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 37 0.008
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 37 0.008
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 30 0.95
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 3.9
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 3.9
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 3.9
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 3.9
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.1
Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical p... 27 8.9
Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 8.9
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 8.9
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 184 bits (447), Expect = 5e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETFNTPAMYVAIQAVLSL
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSL 143
Score = 131 bits (316), Expect = 4e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 184 bits (447), Expect = 5e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETFNTPAMYVAIQAVLSL
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSL 143
Score = 130 bits (313), Expect = 9e-31
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 258
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 ASGRTTGIVLDS 544
ASGRTTGIVLDS
Sbjct: 145 ASGRTTGIVLDS 156
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 184 bits (447), Expect = 5e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETFNTPAMYVAIQAVLSL
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSL 143
Score = 131 bits (316), Expect = 4e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 184 bits (447), Expect = 5e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETFNTPAMYVAIQAVLSL
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSL 143
Score = 131 bits (316), Expect = 4e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 184 bits (447), Expect = 5e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETFNTPAMYVAIQAVLSL
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSL 143
Score = 131 bits (316), Expect = 4e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 184 bits (447), Expect = 5e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETFNTPAMYVAIQAVLSL
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSL 143
Score = 128 bits (309), Expect = 3e-30
Identities = 56/62 (90%), Positives = 62/62 (100%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 258
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 ASGRTTGIVLDS 544
ASGRTTGIVLDS
Sbjct: 145 ASGRTTGIVLDS 156
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 184 bits (447), Expect = 5e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETFNTPAMYVAIQAVLSL
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSL 143
Score = 131 bits (316), Expect = 4e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 184 bits (447), Expect = 5e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 16 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 75
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETFNTPAMYVAIQAVLSL
Sbjct: 76 MTQIMFETFNTPAMYVAIQAVLSL 99
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +1
Query: 211 MVGMGQKDSYVGDEARAK 264
MVGMGQKDSYVGDEA++K
Sbjct: 1 MVGMGQKDSYVGDEAQSK 18
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 184 bits (447), Expect = 5e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 46 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 105
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETFNTPAMYVAIQAVLSL
Sbjct: 106 MTQIMFETFNTPAMYVAIQAVLSL 129
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +1
Query: 133 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 48
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 184 bits (447), Expect = 5e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETFNTPAMYVAIQAVLSL
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSL 143
Score = 131 bits (316), Expect = 4e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 180 bits (437), Expect = 8e-46
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREK
Sbjct: 59 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREK 118
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETFNTPAMYV IQAVLSL
Sbjct: 119 MTQIMFETFNTPAMYVNIQAVLSL 142
Score = 124 bits (300), Expect = 3e-29
Identities = 56/60 (93%), Positives = 60/60 (100%)
Frame = +1
Query: 85 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 131 bits (316), Expect = 4e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
Score = 62.5 bits (145), Expect = 2e-10
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKI 335
QSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 131 bits (316), Expect = 4e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
Score = 62.5 bits (145), Expect = 2e-10
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKI 335
QSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 130 bits (313), Expect = 9e-31
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 258
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
Score = 62.5 bits (145), Expect = 2e-10
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKI 335
QSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 130 bits (313), Expect = 9e-31
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 258
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDM 326
QSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 124 bits (298), Expect = 6e-29
Identities = 52/85 (61%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 431
+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE
Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRE 121
Query: 432 KMTQIMFETFNTPAMYVAIQAVLSL 506
+ +I FETFN PA+Y+ +QAVLSL
Sbjct: 122 RSAEIFFETFNVPALYIQMQAVLSL 146
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARA 261
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A +
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAES 63
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 99 bits (238), Expect = 1e-21
Identities = 43/77 (55%), Positives = 54/77 (70%)
Frame = +3
Query: 276 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 455
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 456 TFNTPAMYVAIQAVLSL 506
+FN P +Y+A+QAVL+L
Sbjct: 140 SFNVPGLYIAVQAVLAL 156
Score = 36.7 bits (81), Expect = 0.011
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 186
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 99.1 bits (236), Expect = 2e-21
Identities = 45/82 (54%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Frame = +3
Query: 264 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMT 440
R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM
Sbjct: 65 RQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMF 124
Query: 441 QIMFETFNTPAMYVAIQAVLSL 506
Q+MFE + ++YVA+QAVL+L
Sbjct: 125 QVMFEQYGFNSIYVAVQAVLTL 146
Score = 47.2 bits (107), Expect = 8e-06
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 252
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEE 60
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 72.9 bits (171), Expect = 1e-13
Identities = 32/71 (45%), Positives = 47/71 (66%)
Frame = +3
Query: 291 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 470
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 471 AMYVAIQAVLS 503
A Y++ VLS
Sbjct: 154 AYYLSKNVVLS 164
Score = 33.5 bits (73), Expect = 0.10
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 186
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.008
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 288 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 461
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.008
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 288 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 461
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 30.7 bits (66), Expect = 0.72
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = -3
Query: 340 CQIFSMSSQLVTIPC-SMGYLRVRIPLLLWPHLLHKSPSVP-YRPSRPD 200
CQ+FS QLVT+ SMG +++++ + P L KS + P P+ P+
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPE 299
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 30.3 bits (65), Expect = 0.95
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +3
Query: 183 RGKAPPSGRDGRYGTEGLLCRR*GQSKRG 269
RGKA +GRDGR G EG R Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 3.9
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 362 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 487
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 158 ASSPAKPALHIPEPLSTTNAATSS 87
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 3.9
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 362 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 487
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 158 ASSPAKPALHIPEPLSTTNAATSS 87
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 3.9
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 362 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 487
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 158 ASSPAKPALHIPEPLSTTNAATSS 87
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 3.9
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 362 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 487
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 158 ASSPAKPALHIPEPLSTTNAATSS 87
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 133 KAGFAGDDAPRAVFPSIVGRPRHQG 207
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -1
Query: 261 CSGLISYIRVLLSHTDHHALMAGPSHDRGEHGARS 157
C G++S I +L+ HT H + H + E R+
Sbjct: 284 CHGVLSTIVMLIVHTPHRKSILATLHFKSEQAVRN 318
>Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -1
Query: 261 CSGLISYIRVLLSHTDHHALMAGPSHDRGEHGARS 157
C G++S I +L+ HT H + H + E R+
Sbjct: 284 CHGVLSTIVMLIVHTPHRKSILATLHFKSEQAVRN 318
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 285 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 386
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 285 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 386
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -1
Query: 273 GYLFCSGLISYIRVLLSHTDHHALMAGPSHDRGEH 169
G++ G +S+I H HHA A P H H
Sbjct: 63 GHISLKGFLSFISPHHGHHTHHAHGAHPGHHEVHH 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,999,823
Number of Sequences: 27780
Number of extensions: 326357
Number of successful extensions: 1295
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1292
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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