Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0618
(549 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 182 1e-46
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 182 2e-46
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 182 2e-46
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 180 6e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 180 7e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 180 7e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 180 7e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 179 1e-45
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 179 1e-45
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 161 2e-40
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 154 3e-38
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 153 7e-38
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 104 3e-23
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 95 4e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 80 8e-16
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 64 8e-11
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 1e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 55 4e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 49 2e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.072
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.7
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.7
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 28 3.6
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 6.2
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 27 8.3
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 8.3
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (443), Expect = 1e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETFNTPAMYVAIQAVLSL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSL 144
Score = 107 bits (258), Expect = 4e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 ASGRTTGIVLDS 544
ASGRTTGIVLDS
Sbjct: 146 ASGRTTGIVLDS 157
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 83/84 (98%), Positives = 83/84 (98%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETFNTPAMYVAIQAVLSL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSL 144
Score = 107 bits (258), Expect = 4e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 ASGRTTGIVLDS 544
ASGRTTGIVLDS
Sbjct: 146 ASGRTTGIVLDS 157
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 83/84 (98%), Positives = 83/84 (98%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETFNTPAMYVAIQAVLSL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSL 144
Score = 107 bits (258), Expect = 4e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 ASGRTTGIVLDS 544
ASGRTTGIVLDS
Sbjct: 146 ASGRTTGIVLDS 157
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 180 bits (438), Expect = 6e-46
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETFN PAMYVAIQAVLSL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSL 144
Score = 107 bits (258), Expect = 4e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 ASGRTTGIVLDS 544
ASGRTTGIVLDS
Sbjct: 146 ASGRTTGIVLDS 157
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 180 bits (437), Expect = 7e-46
Identities = 80/84 (95%), Positives = 84/84 (100%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETFN+PAMYVAIQAVLSL
Sbjct: 121 MTQIMFETFNSPAMYVAIQAVLSL 144
Score = 103 bits (247), Expect = 8e-23
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 ASGRTTGIVLDS 544
ASGRTTGIVLDS
Sbjct: 146 ASGRTTGIVLDS 157
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 180 bits (437), Expect = 7e-46
Identities = 80/84 (95%), Positives = 84/84 (100%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETFN+PAMYVAIQAVLSL
Sbjct: 121 MTQIMFETFNSPAMYVAIQAVLSL 144
Score = 103 bits (247), Expect = 8e-23
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 ASGRTTGIVLDS 544
ASGRTTGIVLDS
Sbjct: 146 ASGRTTGIVLDS 157
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 180 bits (437), Expect = 7e-46
Identities = 80/84 (95%), Positives = 84/84 (100%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETFN+PAMYVAIQAVLSL
Sbjct: 121 MTQIMFETFNSPAMYVAIQAVLSL 144
Score = 103 bits (247), Expect = 8e-23
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 ASGRTTGIVLDS 544
ASGRTTGIVLDS
Sbjct: 146 ASGRTTGIVLDS 157
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 179 bits (436), Expect = 1e-45
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETFN PAMYVAIQAVLSL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSL 144
Score = 107 bits (258), Expect = 4e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 ASGRTTGIVLDS 544
ASGRTTGIVLDS
Sbjct: 146 ASGRTTGIVLDS 157
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 179 bits (436), Expect = 1e-45
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETFN PAMYVAIQAVLSL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSL 144
Score = 107 bits (258), Expect = 4e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 ASGRTTGIVLDS 544
ASGRTTGIVLDS
Sbjct: 146 ASGRTTGIVLDS 157
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 161 bits (392), Expect = 2e-40
Identities = 69/84 (82%), Positives = 79/84 (94%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
Q++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREK
Sbjct: 62 QARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREK 121
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFE+F P+MY+ IQAVLSL
Sbjct: 122 MTQIMFESFAFPSMYIGIQAVLSL 145
Score = 102 bits (244), Expect = 2e-22
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEA+A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 154 bits (374), Expect = 3e-38
Identities = 66/84 (78%), Positives = 78/84 (92%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REK
Sbjct: 16 EARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREK 75
Query: 435 MTQIMFETFNTPAMYVAIQAVLSL 506
MTQIMFETF P+MY+ +QA LSL
Sbjct: 76 MTQIMFETFAVPSMYIGMQAALSL 99
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 211 MVGMGQKDSYVGDEARAK 264
MVGM + D +VGD+A A+
Sbjct: 1 MVGMNENDLFVGDDAEAR 18
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 153 bits (371), Expect = 7e-38
Identities = 72/100 (72%), Positives = 81/100 (81%)
Frame = +3
Query: 207 RDGRYGTEGLLCRR*GQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 386
RDG E + G + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 387 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSL 506
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL L
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYL 133
Score = 60.9 bits (141), Expect = 5e-10
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARA 261
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E A
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 104 bits (250), Expect = 3e-23
Identities = 42/78 (53%), Positives = 57/78 (73%)
Frame = +3
Query: 273 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 452
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 453 ETFNTPAMYVAIQAVLSL 506
E +N +++ IQAVL+L
Sbjct: 126 EKYNFAGVFIQIQAVLTL 143
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 249
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 94.7 bits (225), Expect = 4e-20
Identities = 40/76 (52%), Positives = 53/76 (69%)
Frame = +3
Query: 279 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 458
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 459 FNTPAMYVAIQAVLSL 506
FN P +Y+A+ +VL+L
Sbjct: 146 FNVPGLYIAVNSVLAL 161
Score = 35.9 bits (79), Expect = 0.018
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 100 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 186
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 80.2 bits (189), Expect = 8e-16
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +3
Query: 261 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 440
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 441 QIMFETFNTPAMYVAIQAVLS 503
++MFE + PA+++A VL+
Sbjct: 145 ELMFEKYKVPALFMAKNPVLT 165
Score = 56.8 bits (131), Expect = 9e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 189
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 63.7 bits (148), Expect = 8e-11
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +3
Query: 288 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 464
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 465 TPAMYVAIQAVLSL 506
Y + QAVLSL
Sbjct: 117 VSGFYASEQAVLSL 130
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 100 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 192
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 1e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 261 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 7e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 189
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +3
Query: 279 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 458
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 459 FNTPAMYVA 485
F ++Y+A
Sbjct: 121 FGFSSLYIA 129
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 195
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 48.8 bits (111), Expect = 2e-06
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 288 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 464
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 465 TPAMYVAIQAVLS 503
PA+ + A S
Sbjct: 145 VPAVAFGVDAAFS 157
Score = 44.0 bits (99), Expect = 7e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 249
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.072
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 224 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 87
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 273 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 273 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +2
Query: 401 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRAL 502
GSP+ +G + E+D D + NI+H + +H + A+
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAM 127
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 200 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 78
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 395 H*GSPQPQGQQREDDPDHVRN 457
H GSP+ +G + EDD D + N
Sbjct: 91 HRGSPRVEGDEDEDDVDDIEN 111
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 312 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 461
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,471,986
Number of Sequences: 28952
Number of extensions: 313298
Number of successful extensions: 941
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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