Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0617
(577 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_22624| Best HMM Match : EGF (HMM E-Value=0.0029) 40 0.001
SB_1631| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_52865| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_29891| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_57634| Best HMM Match : EGF_2 (HMM E-Value=0.0014) 36 0.018
SB_6365| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.018
SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_33401| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 35 0.055
SB_1367| Best HMM Match : EGF_2 (HMM E-Value=5.3e-06) 33 0.17
SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_17603| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_23038| Best HMM Match : EGF_2 (HMM E-Value=2.8e-11) 32 0.29
SB_31771| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.29
SB_3772| Best HMM Match : EGF (HMM E-Value=6.3e-06) 32 0.39
SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23) 31 0.51
SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11) 31 0.51
SB_36893| Best HMM Match : Fibrinogen_C (HMM E-Value=2.4e-24) 31 0.67
SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_52863| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_28991| Best HMM Match : EGF_2 (HMM E-Value=2.9e-06) 30 1.2
SB_36177| Best HMM Match : Integrin_beta (HMM E-Value=0) 30 1.6
SB_29802| Best HMM Match : Laminin_EGF (HMM E-Value=0) 30 1.6
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_58330| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 29 2.1
SB_20579| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.39) 29 2.1
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 29 2.7
SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_7506| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_38099| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_4052| Best HMM Match : EGF (HMM E-Value=7.2e-05) 29 3.6
SB_47717| Best HMM Match : EGF (HMM E-Value=1.9e-29) 28 4.8
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_26028| Best HMM Match : EGF (HMM E-Value=0.00014) 28 4.8
SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_31963| Best HMM Match : Integrin_beta (HMM E-Value=0) 28 6.3
SB_38994| Best HMM Match : Integrin_beta (HMM E-Value=0) 28 6.3
SB_21858| Best HMM Match : DUF983 (HMM E-Value=1.5) 28 6.3
SB_830| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_58780| Best HMM Match : VWA (HMM E-Value=1.3e-34) 27 8.3
SB_22269| Best HMM Match : Metallothionein (HMM E-Value=0.89) 27 8.3
SB_29723| Best HMM Match : EGF_2 (HMM E-Value=0.55) 27 8.3
>SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 259 VMSVAAKGAGCALSCSGRGDCMNGTCLC--EIRYSGEGCAGPNLP 387
V G+GC CSG G C +G C+C ++ Y G CA P+ P
Sbjct: 1639 VCDACYSGSGCNEECSGHGKCEDGKCVCDKDLGYKGPVCAIPSCP 1683
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 280 GAGCALSCSGRGDCMNGTCLCEIRYSGEGCAGPNLPYHACIG 405
G+GC CSG G+C+ G C C +G+ G N C G
Sbjct: 1517 GSGCQSECSGHGECVEGKCKCN-EAAGDAYVGVNCELPGCPG 1557
Score = 38.3 bits (85), Expect = 0.004
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 280 GAGCALSCSGRGDCMNGTCLCE 345
G GC + CSG G C+NG C C+
Sbjct: 1388 GRGCNVECSGHGQCVNGACACD 1409
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 286 GCALSCSGRGDCMNGT--CLCEIRYSGEGCAGPNLP 387
G CSG G+C + T C+CE ++G+GC P+ P
Sbjct: 1296 GHRTDCSGHGECNSATHVCVCENGWTGDGCEIPDCP 1331
Score = 31.1 bits (67), Expect = 0.67
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +1
Query: 250 RGAVMSVAAKGAGCALSCSGRGDC--MNGTCLCEIRYSGEGC 369
RG++ V CSG G C N C+C+ +SG GC
Sbjct: 1415 RGSLCEVPGCAGVDGKDCSGHGTCDSANHKCICDPGWSGIGC 1456
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +1
Query: 301 CSGRGDCMNGT---CLCEIRYSGEGCAGPNL 384
CSG+G+C N C C ++ GE C P L
Sbjct: 1597 CSGQGECSNTNPRRCQCFPKWGGEKCEIPCL 1627
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 280 GAGCALSCSGRGDCMNGTCLCEIRYSGEGCAGPNLPYHACIGG 408
G C C G + G+C+C+ Y+G GC + C+ G
Sbjct: 1492 GPACNDPCV-HGREVAGSCVCDPCYTGSGCQSECSGHGECVEG 1533
>SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1530
Score = 41.1 bits (92), Expect = 6e-04
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +1
Query: 235 VVGLLRGAVMSVAAKGAGCALSCSGRGDCMNGTCLCEIRYSGEGC 369
V+ LL G V+++ + AGC C G C+NG C+C + ++G C
Sbjct: 257 VLELLVGNVLALV-RIAGCLYPCMNGGSCINGKCVCAVGFTGNTC 300
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 289 CALSCSGRGDCMNGTCLCEIRYSGEGCA-GPNLPYHACI 402
C C G C NGTC+C +Y+G+ C G NL +C+
Sbjct: 305 CDPPCQNSGTCNNGTCICTKQYTGKSCEHGINLVLSSCV 343
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +1
Query: 283 AGCALSCSGRGDCMN-GTCLCEIRYSGEGCAGPNLPYHACIGGV 411
+ C C G C + TC C Y+G C P ++ GV
Sbjct: 340 SSCVPFCQNGGTCSSPNTCKCPFAYTGNLCQTPKGAFNPEYRGV 383
>SB_22624| Best HMM Match : EGF (HMM E-Value=0.0029)
Length = 115
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1
Query: 289 CALSCSGRGDCMNGTCLCEIRYSGEGCAGPNLPYHACIGGVFLVVAFVCAVQLMICVV 462
C CS G+C N TC+C+ Y+ C+ ++ + G+F+++ V V + + V+
Sbjct: 34 CPNECSNHGNCSNSTCICDKGYTAADCS-MSINTIPELMGLFIIIIIVVVVVVFVVVI 90
>SB_1631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 884
Score = 37.5 bits (83), Expect = 0.008
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 289 CALSCSGRGDCMNGTCLCEIRYSGEGCA 372
C CSG G+C N TC CE ++G C+
Sbjct: 724 CPNDCSGNGNCTNRTCTCEEGFTGADCS 751
>SB_52865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 283 AGCALSCSGRGDCMNGTCLCEIRYSGEGCAGPNLPY 390
A C CSG G C +G C C+ ++ G C NLP+
Sbjct: 141 ANCTNGCSGHGACDSGVCQCQSQWHGVSC---NLPW 173
>SB_29891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 36.7 bits (81), Expect = 0.014
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 295 LSCSGRGDCMNGTCLCEIRYSGEGC 369
L C+GRG C G C+C+ ++G GC
Sbjct: 338 LDCNGRGTCQMGECVCDHPWTGPGC 362
>SB_57634| Best HMM Match : EGF_2 (HMM E-Value=0.0014)
Length = 198
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 289 CALSCSGRGDCMNGTCLCEIRYSGEGCA 372
C CSG G+C N TC+C Y+G C+
Sbjct: 62 CPNDCSGLGNCTNRTCICLDGYTGADCS 89
>SB_6365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1017
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 289 CALSCSGRGDCMNGTCLCEIRYSGEGCA 372
C CSG G+C N TC+C Y+G C+
Sbjct: 380 CPNDCSGLGNCTNRTCICLDGYTGADCS 407
>SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5834
Score = 35.5 bits (78), Expect = 0.031
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Frame = +1
Query: 190 VANSGGLRRWS*HAFVVGLLRGAVMSVAAKGAGCALSCSGRGDCMNGTCLCEIRYSGEGC 369
+ N G+R W+ V V S G C C G C +G C C+ Y G C
Sbjct: 145 LGNDCGIRCWNGTVVVNDGKPECVCSDCFTGVFCDKECDSHGVCRDGKCSCDKGYRGAKC 204
Query: 370 AGPNLPYH--ACIG-GVFLVVAFVC 435
P + C G GV L V C
Sbjct: 205 ETIGCPGNNVDCSGHGVCLSVTQEC 229
Score = 34.7 bits (76), Expect = 0.055
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 286 GCALSCSGRGDCM-NGTCLCEIRYSGEGCAGPNLP 387
G CSG G C+ +G C C+ + G GC P+ P
Sbjct: 82 GYKTDCSGHGSCLADGKCYCDPGWKGVGCHIPHCP 116
Score = 33.5 bits (73), Expect = 0.13
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 277 KGAGCALSCSGRGDCMNGTCLCEIRYSGEGC 369
+G C + CSG G C C+C+ + G C
Sbjct: 302 QGLACDVECSGHGKCNGSHCICDEGHKGVTC 332
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +1
Query: 286 GCALSCSGRGDCMNGT--CLCEIRYSGEGCAGPN 381
G + CSG G C++ T C C + G+GC P+
Sbjct: 211 GNNVDCSGHGVCLSVTQECDCYRGWKGDGCHVPD 244
>SB_33401| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4277
Score = 34.7 bits (76), Expect = 0.055
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 289 CALSCSGRGDCMNGTCLCEIRYSGEGCA 372
C CSGRG C+ TC C ++G C+
Sbjct: 360 CPNQCSGRGRCVKNTCKCRGGWAGSDCS 387
>SB_1367| Best HMM Match : EGF_2 (HMM E-Value=5.3e-06)
Length = 776
Score = 33.1 bits (72), Expect = 0.17
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 289 CALSCSGRGDCMNGTCLCEIRYSGEGCA 372
C C+G G C C C++ Y+G C+
Sbjct: 720 CPDDCNGHGKCRERICTCDVGYTGADCS 747
>SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 32.7 bits (71), Expect = 0.22
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +1
Query: 298 SCSGRGDCM-NGTCLCEIRYSGEGCA 372
+CS RG+C +G C C++ Y+G C+
Sbjct: 156 NCSNRGECFESGFCKCDVGYTGPDCS 181
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 301 CSGRGDCMNG-TCLCEIRYSGEGCAGPN 381
CSGRG C+N C C ++G CA P+
Sbjct: 50 CSGRGSCVNAYRCECNSGWTGISCAVPD 77
>SB_17603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 32.7 bits (71), Expect = 0.22
Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = -3
Query: 437 AHTKATTRNTPPIHA*YGRLGPAHPS---PEYRISQRQVPFMQSP--RPLQLSAQPAPFA 273
A A N P H G + P HP P+Y + Q+Q P Q P P LS+ P P
Sbjct: 675 AQVPAPCGNVQPQHGHPG-MYPQHPQGSYPQYHVPQQQYPGQQQPVNGPPHLSSVPQPQP 733
Query: 272 ATDITAPRSKPTTNACYDQRRR 207
T R +NA D R R
Sbjct: 734 PTS----RGGRASNALKDSRIR 751
>SB_23038| Best HMM Match : EGF_2 (HMM E-Value=2.8e-11)
Length = 1477
Score = 32.3 bits (70), Expect = 0.29
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 289 CALSCSGRGDCM-NGTCLCEIRYSGEGCA 372
C +CS G C+ TC+C+ ++SG C+
Sbjct: 1348 CENNCSNHGQCVARDTCVCDQKFSGNDCS 1376
Score = 32.3 bits (70), Expect = 0.29
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 289 CALSCSGRGDCM-NGTCLCEIRYSGEGCA 372
C +CS G C+ TC+C+ ++SG C+
Sbjct: 1380 CENNCSNHGQCVARDTCVCDQKFSGNDCS 1408
>SB_31771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1963
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 376 PNLPYHACIGGVFLVVAFVCAVQLMICVVTEYRKLKAPTFLRAC---RSPTQKMLYLVAF 546
P + A IG L++AF C + L +C+ + + P F AC R+P +K + V
Sbjct: 670 PRWTWVAIIGAGTLILAFTCMLLLAVCLKSAVLEALHPIFDTACAVTRTPLKKTIMAVFI 729
Query: 547 LAS 555
+ +
Sbjct: 730 IVA 732
>SB_3772| Best HMM Match : EGF (HMM E-Value=6.3e-06)
Length = 519
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +1
Query: 283 AGCALSCSGRGDCMN-GTCLCEIRYSGEGC 369
A C L C G C++ TC C+ Y+GE C
Sbjct: 487 AQCGLPCLNGGSCVSRNTCACKKGYTGERC 516
>SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23)
Length = 300
Score = 31.5 bits (68), Expect = 0.51
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = +1
Query: 280 GAGCALSCSG--RG---DCMNGTCLCEIRYSGEGC 369
G GC+ CS G D +NGTC C+ ++GE C
Sbjct: 95 GYGCSKKCSNCQHGATCDPVNGTCSCQTGWTGENC 129
>SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11)
Length = 3369
Score = 31.5 bits (68), Expect = 0.51
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +1
Query: 289 CALSCSGRGDCMNGTCLCEIRYSGEGCAGPNL-PYHACIGGVFLVVAFVC 435
C C GDC+ TC C ++G C+ + H C G V VC
Sbjct: 2254 CPNGCFHNGDCIGSTCFCYRGWTGHDCSQFHCRDVHECSGFGTCVGPNVC 2303
>SB_36893| Best HMM Match : Fibrinogen_C (HMM E-Value=2.4e-24)
Length = 411
Score = 31.1 bits (67), Expect = 0.67
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 298 SCSGRGDCMNGTCLCEIRYSGEGC 369
SC+ + D +N TC C + Y GE C
Sbjct: 159 SCTDKSDGLNYTCACRMGYEGEIC 182
>SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1387
Score = 31.1 bits (67), Expect = 0.67
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 289 CALSCSGRGDCMNGTCLCEIR--YSGEGCAGPNLPYHAC 399
C CS G C+ G C+C+ ++G CA + + C
Sbjct: 806 CVNGCSKHGKCIRGFCICDHSHYFNGAECAPYKISHRPC 844
>SB_52863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +1
Query: 289 CALSCSGRGDC--MNGTCLCEIRYSGEGCA 372
C +CSG G C +G C C Y+G C+
Sbjct: 364 CPNNCSGHGSCNSASGLCTCAPGYAGTDCS 393
>SB_28991| Best HMM Match : EGF_2 (HMM E-Value=2.9e-06)
Length = 263
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +1
Query: 265 SVAAKGAGCALSCSGRGDC--MNGTCLCEIRYSGEGCAGPNLP 387
++A + C CS G C + G C CE Y CA P P
Sbjct: 80 ALAEQRISCPKDCSHHGVCDKLTGVCSCEKGYLPPDCAAPVNP 122
>SB_36177| Best HMM Match : Integrin_beta (HMM E-Value=0)
Length = 722
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +1
Query: 280 GAGCALSCSGRGDCMNGTCLCEIR--YSGEGC 369
G G + CSGRG C G C+C Y G C
Sbjct: 526 GQGGKVLCSGRGTCECGQCVCNATSGYVGAFC 557
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 280 GAGCALSCSGRGDCMNGTCLC-EIRYSGE 363
G A CSGRG C G C+C E + GE
Sbjct: 429 GNSTAQVCSGRGVCDCGECICTESKTKGE 457
>SB_29802| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 546
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +1
Query: 289 CALSCSGRGDC-MNGTCLCEIRYSGEGC 369
CA S SG G C G C+C Y+G C
Sbjct: 93 CACSNSGFGTCGQYGECICRPGYTGRSC 120
>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2641
Score = 29.5 bits (63), Expect = 2.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 283 AGCALSCSGRGDCMNGTCLCEIRYSGEGC 369
A + +C G C++G C C ++G C
Sbjct: 2335 AAASCNCENGGKCVDGVCQCPAGHTGANC 2363
>SB_58330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -3
Query: 563 RIREARKATRYSIFWVGDLQALRKVGAFSFLYSVTTHIISWTAHTKATTRNTP 405
RIREA + T FWVG + K G + ++ H++S TR P
Sbjct: 175 RIREAAQTTDKETFWVG-ANDMEKYGTYQWI-DGRAHVVSEVMWGSRKTRKQP 225
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 7/40 (17%)
Frame = +1
Query: 280 GAGCALSCSGRGDCMNGT-------CLCEIRYSGEGCAGP 378
G ++CS + DC+NG+ C+C R +G+ C P
Sbjct: 496 GGSWGVNCSSKCDCINGSCDPVTGACVCNRRVTGQRCDKP 535
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +1
Query: 280 GAGCALSCS----GRGDCMNGTCLCEIRYSGEGC 369
G GC +C+ + D + GTC C + Y G+ C
Sbjct: 862 GPGCHNNCTCLNGAQCDHVTGTCTCPVGYKGKYC 895
>SB_20579| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.39)
Length = 721
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = -3
Query: 419 TRNTPPIHA*YGRLGPAHPSPEYRISQRQVPFMQSPRPLQLSAQPAPFAATDITAPRSKP 240
+R+ PP A PA P PE ISQ + QS + +A AP P S+
Sbjct: 528 SRSRPPSRA----SSPAAPQPEPTISQSEPTIRQSESAAKDTAPEAPAQPPTAADPVSRS 583
Query: 239 TT 234
TT
Sbjct: 584 TT 585
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -3
Query: 380 LGPAHPSPEYRISQRQ--VPFMQSPRPLQLSAQPAPFAATDITAPRSKPTTNA 228
L +P EY I ++ V + P+P + PAP T A + P+T A
Sbjct: 119 LNDDNPLKEYNIDEKSFVVIMVAKPKPAPAAVAPAPVTTTIPQAATASPSTQA 171
>SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1286
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 277 KGAGCALSCSGRGDCMNGTCLCEIRYSGEGCAGPN 381
K A C C G C+N C C Y+ E C N
Sbjct: 468 KQAECVPECLNGGVCVNRQCQCPQGYTMEACQKVN 502
>SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 301 CSGRGDCMNGTCLCEIRYSGEG 366
CS DC+ G C+C+ Y G+G
Sbjct: 251 CSVNADCILGHCVCKDGYHGDG 272
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 289 CALSCSGRGDCMNGTCLCEIRYSGEG 366
CA C C NG C+C Y G+G
Sbjct: 390 CA-KCDMHATCRNGKCVCMEGYEGDG 414
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Frame = +1
Query: 301 CSGRGDCMNGTCLCEIRYSGEG--CAGPNLP-YHA---CIGG 408
C+ C+ G C+C Y G G C P P HA C+ G
Sbjct: 542 CNPNAHCLKGVCVCFDHYIGNGYNCQPPCTPTCHAPSTCVSG 583
>SB_7506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +1
Query: 301 CSGRGDCMNGTCLC--EIRYSGEGC 369
CSGRG+C G C+C + Y G C
Sbjct: 2 CSGRGECECGKCVCNASLPYIGVYC 26
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = +1
Query: 298 SCSGRGDCMNGT----CLCEIRYSGEGC 369
+CSGRG+C++ C C YSG+ C
Sbjct: 2667 TCSGRGNCISQVSSYLCNCTTDYSGKDC 2694
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = +1
Query: 298 SCSGRGDCMNGT----CLCEIRYSGEGCAGP 378
+CS G C+N T C C + YSG+ C P
Sbjct: 2254 TCSNGGRCINITYSYSCECPLVYSGKHCDDP 2284
>SB_38099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 380
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 359 PEYRISQRQVPFMQSPRPLQLSAQPAP-FAATDITAPRSKPTTNAC-YDQRRRP 204
P+Y I++R+ Q P P ++ A+P P + D + + T+ C Y P
Sbjct: 196 PDYPITERETYKAQPPNPPEIPARPLPQWTVFDCSLTQWPDNTDTCEYPSSNHP 249
>SB_4052| Best HMM Match : EGF (HMM E-Value=7.2e-05)
Length = 117
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +1
Query: 289 CALSCSGRGDCMNGTCLCEIR--YSGEGCA 372
C CS G C+ G C+C+ ++G CA
Sbjct: 39 CVNGCSKHGKCIRGFCICDHSHYFNGAECA 68
>SB_47717| Best HMM Match : EGF (HMM E-Value=1.9e-29)
Length = 214
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = +1
Query: 301 CSGRGDCMNG----TCLCEIRYSGEGCAGPNLPYHACI 402
CS G C++G TC C + Y+G C N+ + CI
Sbjct: 95 CSEHGACIDGVNSYTCACNLGYTGSTC---NVTVNDCI 129
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Frame = +1
Query: 247 LRGAVMSVAAKGAGCALS-CSGRGDCMNG-----TCLCEIRYSGEGC 369
+R ++A G C+ + C G C +C C +R+SGE C
Sbjct: 1294 VRDVRQAIADAGTPCSSNPCQNGGTCTEAAAGRYSCACPVRFSGEHC 1340
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = +1
Query: 301 CSGRGDCMNG----TCLCEIRYSGEGCAGPNLPYHACI 402
CS G C++G TC C + Y+G C N+ + CI
Sbjct: 674 CSEHGACIDGVNSYTCACNLGYTGSTC---NVTVNDCI 708
>SB_26028| Best HMM Match : EGF (HMM E-Value=0.00014)
Length = 416
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 253 GAVMSVAAKGAGCALSCSGRGDCMNGTCLCEIRYSGEGC 369
G S C ++ + R D ++G+CLC+ + G+ C
Sbjct: 175 GKFGSTCESDCTCHMTNTDRCDHVDGSCLCKAGFQGDRC 213
>SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 848
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +1
Query: 298 SCSGRGDCMNGTCLCEIRY--SGEGCAGPN 381
SC CM G C+C Y G+ C G N
Sbjct: 815 SCPPNSHCMRGVCVCGKGYYFDGKHCVGKN 844
>SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 27.9 bits (59), Expect = 6.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 301 CSGRGDCMNGTCLCEIRYSGEG 366
C +C+NGTC C + G G
Sbjct: 386 CDLNAECLNGTCECRSGFVGNG 407
>SB_31963| Best HMM Match : Integrin_beta (HMM E-Value=0)
Length = 628
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 283 AGCALSCSGRGDCMNGTCLCEIRYSGEGCAGPNLPYHACIGGV 411
A A S G C G C C +YSG+ C P +C GG+
Sbjct: 468 AQAARGGSDHGTCTCGQCTCTRKYSGKYC--EECP--SCEGGI 506
>SB_38994| Best HMM Match : Integrin_beta (HMM E-Value=0)
Length = 467
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 301 CSG--RGDCMNGTCLCEIRYSGEGCAGPNLPYHACIGGV 411
C G RG C G C C +Y+G+ C P +C GG+
Sbjct: 275 CGGPDRGTCECGKCKCNRKYTGQYC--EECP--SCEGGI 309
>SB_21858| Best HMM Match : DUF983 (HMM E-Value=1.5)
Length = 238
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = +1
Query: 307 GRGDCMNGTCLCEIRYSGEGCAGPNLPYHACIGGVFLVVAFVCAVQLMICVV 462
G D +N C+ +GC G + + C+ + +++ V LM+ V+
Sbjct: 54 GDSDFINNDRSCDGCGGDDGCGGDYIDGYGCVVVMIMIIVAVVVTLLMMTVI 105
>SB_830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1390
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Frame = -3
Query: 437 AHTKATTRNTPPIHA*YGRL-GPAHPSPEYRISQRQVPFMQSPRPLQLSAQPAPFAATDI 261
AH K T + H+ + R G PSP SQ +QS + A P P A
Sbjct: 543 AHKKQTGEDKDKAHSTFSRTPGSRDPSPTSSNSQNSQDALQSSQASISQAAPMPIKARPS 602
Query: 260 TAPRSKPTTNACYD 219
++ T A D
Sbjct: 603 EGHENQSTPIALID 616
>SB_58780| Best HMM Match : VWA (HMM E-Value=1.3e-34)
Length = 264
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = +1
Query: 298 SCSGRGDCMNGT----CLCEIRYSGEGCAGP 378
+CS G C+N T C C + YSG+ C P
Sbjct: 11 TCSNGGRCINITYSYSCECPLVYSGKHCDDP 41
>SB_22269| Best HMM Match : Metallothionein (HMM E-Value=0.89)
Length = 251
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/83 (24%), Positives = 32/83 (38%)
Frame = -3
Query: 356 EYRISQRQVPFMQSPRPLQLSAQPAPFAATDITAPRSKPTTNACYDQRRRPPLFATVAVI 177
E+ Q ++ F P P +A P P T T P N+ ++ R L T
Sbjct: 93 EFENVQGKLTFDACPTPPGTTACPTPPGTTACTTPPGTTRHNSLHNTTRHNSLHNTTRHN 152
Query: 176 FIN*NSRCWKIHNFVSLNTISQT 108
+ +R +HN N++ T
Sbjct: 153 SLPNTTRHNSLHNTTRHNSLHNT 175
>SB_29723| Best HMM Match : EGF_2 (HMM E-Value=0.55)
Length = 319
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +1
Query: 298 SCSGRGDC-MNGTCLCEIRYSGEGCAGP 378
+CS G C GTC C ++G C P
Sbjct: 291 NCSATGGCCFTGTCQCLPNFTGVNCETP 318
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,208,801
Number of Sequences: 59808
Number of extensions: 352229
Number of successful extensions: 1397
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1392
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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