Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0616
         (641 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC128587-1|AAI28588.1|  410|Homo sapiens ATG9B protein protein.        30   6.1  
AY515311-1|AAS87212.1|  924|Homo sapiens sONE protein.                 30   6.1  
AY316116-1|AAQ86941.1|  363|Homo sapiens SONE protein.                 30   6.1  

>BC128587-1|AAI28588.1|  410|Homo sapiens ATG9B protein protein.
          Length = 410

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 462 RMVA*LFTVRITGRLTDILSPIMTPMFAGFYF 557
           R +A L   R    L ++LSP++TP+F  F+F
Sbjct: 100 RQMAQLLQYRAVSLLEELLSPLLTPLFLLFWF 131


>AY515311-1|AAS87212.1|  924|Homo sapiens sONE protein.
          Length = 924

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 462 RMVA*LFTVRITGRLTDILSPIMTPMFAGFYF 557
           R +A L   R    L ++LSP++TP+F  F+F
Sbjct: 614 RQMAQLLQYRAVSLLEELLSPLLTPLFLLFWF 645


>AY316116-1|AAQ86941.1|  363|Homo sapiens SONE protein.
          Length = 363

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 462 RMVA*LFTVRITGRLTDILSPIMTPMFAGFYF 557
           R +A L   R    L ++LSP++TP+F  F+F
Sbjct: 53  RQMAQLLQYRAVSLLEELLSPLLTPLFLLFWF 84


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,039,230
Number of Sequences: 237096
Number of extensions: 1644464
Number of successful extensions: 1965
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1965
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)