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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0615
         (633 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||...   176   2e-45
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s...   101   7e-23
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce...   101   1e-22
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb...    97   1e-21
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy...    71   1e-13
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe...    64   1e-11
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc...    56   3e-09
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa...    43   3e-05
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr...    36   0.005
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce...    32   0.079
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    30   0.32 
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos...    29   0.42 
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha...    28   1.3  
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M...    27   3.0  
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo...    27   3.0  
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p...    26   3.9  
SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|ch...    26   3.9  
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual    26   5.2  
SPBC530.12c |pdf1||palmitoyl protein thioesterase-dolichol pyrop...    25   6.9  
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu...    25   9.1  
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc...    25   9.1  
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa...    25   9.1  

>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 375

 Score =  176 bits (429), Expect = 2e-45
 Identities = 79/85 (92%), Positives = 81/85 (95%)
 Frame = +3

Query: 255 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 434
           TLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPK+NREKMTQI+FE
Sbjct: 66  TLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQIIFE 125

Query: 435 TFNTPAMYVAIQAVLSLYASGRTTG 509
           TFN PA YVAIQAVLSLYASGRTTG
Sbjct: 126 TFNAPAFYVAIQAVLSLYASGRTTG 150



 Score =  133 bits (321), Expect = 2e-32
 Identities = 60/69 (86%), Positives = 64/69 (92%)
 Frame = +1

Query: 64  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 243
           +EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSK
Sbjct: 2   EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61

Query: 244 RGILPSNTP 270
           RGIL    P
Sbjct: 62  RGILTLKYP 70



 Score = 63.3 bits (147), Expect = 3e-11
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = +2

Query: 509 IVLDSGDGVSHTVPIYEGYALPHAILRLDFS 601
           IVLDSGDGV+HTVPIYEGYALPHAI+RLD +
Sbjct: 151 IVLDSGDGVTHTVPIYEGYALPHAIMRLDLA 181


>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
           subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 390

 Score =  101 bits (243), Expect = 7e-23
 Identities = 42/84 (50%), Positives = 64/84 (76%)
 Frame = +3

Query: 258 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 437
           +KYP+E+GI+ ++++M ++W +TF+ +L++ P    +LLTE P+NP ANREKM + MFE 
Sbjct: 67  VKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCETMFER 126

Query: 438 FNTPAMYVAIQAVLSLYASGRTTG 509
           +    +YVAIQAVLSLYA G ++G
Sbjct: 127 YGFGGVYVAIQAVLSLYAQGLSSG 150



 Score = 58.8 bits (136), Expect = 6e-10
 Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
 Frame = +1

Query: 70  EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSK 243
           E A +V+DNG+G  K G+A D+ PR  FPSIVGRP  R +     +  KD  VGDEA++ 
Sbjct: 2   ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61

Query: 244 RGILPSNTP 270
           R +L    P
Sbjct: 62  RSLLQVKYP 70



 Score = 42.7 bits (96), Expect = 4e-05
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = +2

Query: 509 IVLDSGDGVSHTVPIYEGYALPHAILRLD 595
           +V+DSGDGV+H VP+YE   L H + RLD
Sbjct: 151 VVVDSGDGVTHIVPVYESVVLNHLVGRLD 179


>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 427

 Score =  101 bits (241), Expect = 1e-22
 Identities = 43/80 (53%), Positives = 55/80 (68%)
 Frame = +3

Query: 255 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 434
           +L YPI HG + NWD ME+ W  + +  LR  PE+H  LLTE PLNP  NRE   +IMFE
Sbjct: 89  SLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFE 148

Query: 435 TFNTPAMYVAIQAVLSLYAS 494
           +FN   +Y+A+QAVL+L AS
Sbjct: 149 SFNCAGLYIAVQAVLALAAS 168



 Score = 42.7 bits (96), Expect = 4e-05
 Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
 Frame = +1

Query: 82  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKDSYVGDE 231
           +++DNG+G  K G+AG+DAP  VFP+++   R  G   G  +  K SY+  +
Sbjct: 8   IIMDNGTGYSKLGYAGNDAPSYVFPTVIA-TRSAGASSGPAVSSKPSYMASK 58



 Score = 36.7 bits (81), Expect = 0.003
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = +2

Query: 494 RSYHRIVLDSGDGVSHTVPIYEGYALPHAI 583
           RS    V+DSGDGV+H +P+ EGY +  +I
Sbjct: 177 RSLTGTVVDSGDGVTHIIPVAEGYVIGSSI 206


>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score = 97.5 bits (232), Expect = 1e-21
 Identities = 43/85 (50%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
 Frame = +3

Query: 258 LKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 434
           ++ PIE GI+ NW DME+IW + + ++ L   PEEHP+LLTE PL    N+EK+ +  +E
Sbjct: 71  IQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYE 130

Query: 435 TFNTPAMYVAIQAVLSLYASGRTTG 509
           T N PA+  ++Q VL+LYAS RTTG
Sbjct: 131 TLNVPALSFSLQPVLALYASARTTG 155



 Score = 77.0 bits (181), Expect = 2e-15
 Identities = 34/63 (53%), Positives = 44/63 (69%)
 Frame = +1

Query: 82  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILPS 261
           + +DNGSG  KAGFAGDD P+ +FP+ VGR +H+ VM    QKD +VG EAQ+ RG+L  
Sbjct: 12  ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71

Query: 262 NTP 270
             P
Sbjct: 72  QRP 74



 Score = 41.1 bits (92), Expect = 1e-04
 Identities = 15/25 (60%), Positives = 23/25 (92%)
 Frame = +2

Query: 509 IVLDSGDGVSHTVPIYEGYALPHAI 583
           IVL+ GDG++H+VPIY+G+++P AI
Sbjct: 156 IVLECGDGLTHSVPIYDGFSIPSAI 180


>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 433

 Score = 70.9 bits (166), Expect = 1e-13
 Identities = 33/83 (39%), Positives = 47/83 (56%)
 Frame = +3

Query: 258 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 437
           +K  I +G V NWD    +W +    +L+  P EHP+L+TE   NP  NR K  + MFE+
Sbjct: 65  IKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMFES 124

Query: 438 FNTPAMYVAIQAVLSLYASGRTT 506
              PA Y+A Q   + +ASG+ T
Sbjct: 125 LRCPATYLAKQETCAAFASGKGT 147



 Score = 40.3 bits (90), Expect = 2e-04
 Identities = 16/34 (47%), Positives = 24/34 (70%)
 Frame = +1

Query: 67  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 168
           +EV+A+V+D GS   + GF+G+D P+ V PS  G
Sbjct: 9   DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCG 42


>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 721

 Score = 64.5 bits (150), Expect = 1e-11
 Identities = 28/82 (34%), Positives = 48/82 (58%)
 Frame = +3

Query: 267 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 446
           P E  +++NWD ME++  +TF  +L +   EHP+ +TE   NP   R  MT+++FE +N 
Sbjct: 86  PFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFELYNA 144

Query: 447 PAMYVAIQAVLSLYASGRTTGS 512
           P++   I  + S Y + + + S
Sbjct: 145 PSVAYGIDGLFSFYHNTKPSSS 166



 Score = 35.9 bits (79), Expect = 0.005
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +1

Query: 82  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 177
           LV+DNGS   +AG+ G+  P+ VF ++V R R
Sbjct: 27  LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYR 58


>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
           Arp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 430

 Score = 56.4 bits (130), Expect = 3e-09
 Identities = 23/77 (29%), Positives = 45/77 (58%)
 Frame = +3

Query: 276 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 455
           +GI+ +W+     W      +L+V P E+ +++TE   NP++ R+++ +  FE  + PA 
Sbjct: 74  NGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAF 133

Query: 456 YVAIQAVLSLYASGRTT 506
           Y+  QAV   +A+ ++T
Sbjct: 134 YLTKQAVCVAFANSKST 150



 Score = 38.7 bits (86), Expect = 7e-04
 Identities = 20/57 (35%), Positives = 33/57 (57%)
 Frame = +1

Query: 67  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 237
           EE+ +LV+D GS   + G+AG+++P  + PS      + GV   +  ++ YV DE Q
Sbjct: 8   EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQ 58


>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
           Arp9|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 523

 Score = 43.2 bits (97), Expect = 3e-05
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
 Frame = +3

Query: 267 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFE 434
           PI+ G V +W+ ++  W H  Y+ L   P +    +PV L         +RE  TQ  FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171

Query: 435 TFNTPAMYVAIQAVLSLYASG 497
               P   +A + ++ LYA G
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIG 192


>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1517

 Score = 35.9 bits (79), Expect = 0.005
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +1

Query: 127 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILPSNTPSNTESSL 291
           G+  PRA F  ++  P H G+++ M  KD   G+E  S +G     TP N  S +
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTPENEISEV 554


>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1666

 Score = 31.9 bits (69), Expect = 0.079
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
 Frame = +3

Query: 327  FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 470
            +Y  L    E+HP+LLT+  A L P+ +  ++ +I  ++ NTP +    VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 29.9 bits (64), Expect = 0.32
 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = -2

Query: 224 PT*ESFCPI-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 63
           PT  S  P+ PT+ P     P    N     S P         PL+TTN  TS+S
Sbjct: 401 PTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455


>SPAC20G8.05c |cdc15||cell division control protein
           Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 927

 Score = 29.5 bits (63), Expect = 0.42
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -3

Query: 265 YLRVGYLFCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTR 146
           Y +   L   +  L+ K+PS PY  SRP   A   S  TR
Sbjct: 296 YFKENGLNYDIDQLISKAPSYPYSSSRPSASASLASSPTR 335


>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
           Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 884

 Score = 27.9 bits (59), Expect = 1.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 519 TPATVSPTPCPSTKDTHSPTPSCVWTLARSRPP 617
           TPA  +P P P+ K  H P P    +++ S PP
Sbjct: 728 TPAPPTPAPTPAVKH-HPPPPPVRSSISPSMPP 759


>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 309

 Score = 26.6 bits (56), Expect = 3.0
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -2

Query: 227 SPT*ESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 111
           S T +SF   P+PT  P    LPT   NT +    P+ PAL
Sbjct: 64  SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101


>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1224

 Score = 26.6 bits (56), Expect = 3.0
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +3

Query: 501 TTGSCWTPATVSPTPCPSTKDT 566
           TT S  TPA V P P PST  T
Sbjct: 838 TTSSHITPADVHPLPPPSTSTT 859


>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 226

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +3

Query: 369 LLTEAPLNPKANREKMTQIMFETFN 443
           +L  APL+ +   +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205


>SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 397

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 20/73 (27%), Positives = 28/73 (38%)
 Frame = +3

Query: 405 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGSCWTPATVSPTPCPSTKDTHSPTPS 584
           RE++ Q+  +    P+ Y+     LS Y S  +           P+  PST   HSP P 
Sbjct: 134 RERLNQVELQLSERPSSYLGYHNNLSPYRSPNSY----------PSLLPSTHSPHSPAPL 183

Query: 585 CVWTLARSRPPDY 623
                A  R   Y
Sbjct: 184 STMQTALMRLRTY 196


>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1828

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 109 TYRSHCLLPTRQLLRRTS*ISEI 41
           TYR H  +PT  LL  T  +SEI
Sbjct: 168 TYRDHDAIPTATLLNPTLDVSEI 190


>SPBC530.12c |pdf1||palmitoyl protein thioesterase-dolichol
           pyrophosphate phosphatase fusion 1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 603

 Score = 25.4 bits (53), Expect = 6.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 607 DRAKVQTQDGVGECVSFVDGHGVGDT 530
           D+ ++   DG  E +  V  HG+GDT
Sbjct: 12  DKVRLAINDGASEQLPVVIWHGLGDT 37


>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
           Cct5|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 546

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 242 KEVSYPQIPHRTRN 283
           K++S+PQ+PHR  N
Sbjct: 234 KDMSHPQMPHRIEN 247


>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1016

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 519 TPATVSPTPCPSTKDTHSPTPSCVWTLARS 608
           T ++++PTP  ++  T +PT +   T A+S
Sbjct: 846 TTSSITPTPTTTSSITPTPTTTSTTTTAQS 875


>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1628

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +2

Query: 383  SPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYH 505
            +PQ +    E++ D++R++  +RH RR P +A  +  R  H
Sbjct: 1428 TPQSRSFTNENN-DNLRSV--SRHTRREPQQAQNLNARREH 1465


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,994,138
Number of Sequences: 5004
Number of extensions: 69798
Number of successful extensions: 264
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 258
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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