Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0615
(633 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 1e-47
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 1e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0) 186 1e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 186 1e-47
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 2e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 135 3e-32
SB_54| Best HMM Match : Actin (HMM E-Value=0) 105 3e-23
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 3e-22
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 87 1e-17
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 74 8e-14
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 61 6e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 57 1e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 2e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 36 0.027
SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073) 33 0.25
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 32 0.34
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.59
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.59
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.59
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 31 0.78
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 31 0.78
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 30 1.4
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 1.4
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 30 1.8
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 30 1.8
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 30 1.8
SB_43322| Best HMM Match : Peptidase_S9 (HMM E-Value=0.032) 30 1.8
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 30 1.8
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_19798| Best HMM Match : Calx-beta (HMM E-Value=6.3e-12) 29 2.4
SB_50702| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 2.4
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_53299| Best HMM Match : DUF1685 (HMM E-Value=0.67) 28 5.5
SB_38004| Best HMM Match : CXCXC (HMM E-Value=5.5e-08) 28 5.5
SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_377| Best HMM Match : IQ (HMM E-Value=0.0002) 28 7.2
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 27 9.6
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_8849| Best HMM Match : F-box (HMM E-Value=0.86) 27 9.6
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 27 9.6
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8) 27 9.6
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 27 9.6
SB_12805| Best HMM Match : LicD (HMM E-Value=9.7e-06) 27 9.6
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 27 9.6
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 27 9.6
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 27 9.6
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 186 bits (453), Expect = 1e-47
Identities = 93/126 (73%), Positives = 95/126 (75%)
Frame = +3
Query: 255 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 434
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 435 TFNTPAMYVAIQAVLSLYASGRTTGSCWTPATVSPTPCPSTKDTHSPTPSCVWTLARSRP 614
TFN+PAMYVAIQAVLSLYASGRTTG P + P LA
Sbjct: 127 TFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDL 186
Query: 615 PDYLMK 632
DYLMK
Sbjct: 187 TDYLMK 192
Score = 136 bits (330), Expect = 1e-32
Identities = 64/71 (90%), Positives = 66/71 (92%)
Frame = +1
Query: 58 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 237
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 238 SKRGILPSNTP 270
SKRGIL P
Sbjct: 61 SKRGILTLKYP 71
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 186 bits (453), Expect = 1e-47
Identities = 93/126 (73%), Positives = 95/126 (75%)
Frame = +3
Query: 255 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 434
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 66 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 125
Query: 435 TFNTPAMYVAIQAVLSLYASGRTTGSCWTPATVSPTPCPSTKDTHSPTPSCVWTLARSRP 614
TFN+PAMYVAIQAVLSLYASGRTTG P + P LA
Sbjct: 126 TFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 185
Query: 615 PDYLMK 632
DYLMK
Sbjct: 186 TDYLMK 191
Score = 134 bits (323), Expect = 7e-32
Identities = 62/69 (89%), Positives = 65/69 (94%)
Frame = +1
Query: 64 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 243
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 244 RGILPSNTP 270
RGIL P
Sbjct: 62 RGILTLKYP 70
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 186 bits (453), Expect = 1e-47
Identities = 93/126 (73%), Positives = 95/126 (75%)
Frame = +3
Query: 255 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 434
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 66 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 125
Query: 435 TFNTPAMYVAIQAVLSLYASGRTTGSCWTPATVSPTPCPSTKDTHSPTPSCVWTLARSRP 614
TFN+PAMYVAIQAVLSLYASGRTTG P + P LA
Sbjct: 126 TFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 185
Query: 615 PDYLMK 632
DYLMK
Sbjct: 186 TDYLMK 191
Score = 135 bits (326), Expect = 3e-32
Identities = 63/69 (91%), Positives = 65/69 (94%)
Frame = +1
Query: 64 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 243
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 244 RGILPSNTP 270
RGIL P
Sbjct: 62 RGILTLKYP 70
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 186 bits (453), Expect = 1e-47
Identities = 93/126 (73%), Positives = 95/126 (75%)
Frame = +3
Query: 255 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 434
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 435 TFNTPAMYVAIQAVLSLYASGRTTGSCWTPATVSPTPCPSTKDTHSPTPSCVWTLARSRP 614
TFN+PAMYVAIQAVLSLYASGRTTG P + P LA
Sbjct: 127 TFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 186
Query: 615 PDYLMK 632
DYLMK
Sbjct: 187 TDYLMK 192
Score = 141 bits (341), Expect = 5e-34
Identities = 65/71 (91%), Positives = 67/71 (94%)
Frame = +1
Query: 58 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 237
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 238 SKRGILPSNTP 270
SKRGIL P
Sbjct: 61 SKRGILTLKYP 71
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 186 bits (452), Expect = 2e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 434
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 435 TFNTPAMYVAIQAVLSLYASGRTTG 509
TFN+PAMYVAIQAVLSLYASGRTTG
Sbjct: 127 TFNSPAMYVAIQAVLSLYASGRTTG 151
Score = 136 bits (330), Expect = 1e-32
Identities = 62/71 (87%), Positives = 66/71 (92%)
Frame = +1
Query: 58 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 237
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 238 SKRGILPSNTP 270
SKRGIL P
Sbjct: 61 SKRGILTLKYP 71
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/22 (81%), Positives = 20/22 (90%), Gaps = 2/22 (9%)
Frame = +2
Query: 509 IVLDSGDGVSHTVPIYE--GYA 568
IV+DSGDGVSHTVPIYE GY+
Sbjct: 152 IVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 135 bits (326), Expect = 3e-32
Identities = 62/69 (89%), Positives = 65/69 (94%)
Frame = +1
Query: 64 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 243
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 244 RGILPSNTP 270
RGIL P
Sbjct: 62 RGILTLKYP 70
Score = 64.5 bits (150), Expect = 7e-11
Identities = 39/77 (50%), Positives = 43/77 (55%)
Frame = +3
Query: 402 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGSCWTPATVSPTPCPSTKDTHSPTP 581
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTG P + P
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 582 SCVWTLARSRPPDYLMK 632
LA DYLMK
Sbjct: 138 IIRLDLAGRDLTDYLMK 154
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +3
Query: 255 TLKYPIEHGIVTNWDDMEKIWHHTF 329
TLKYPIEHGIVTNWDDMEKI TF
Sbjct: 66 TLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 105 bits (252), Expect = 3e-23
Identities = 47/68 (69%), Positives = 58/68 (85%)
Frame = +3
Query: 309 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 488
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 489 ASGRTTGS 512
ASGRTTG+
Sbjct: 2189 ASGRTTGT 2196
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 82 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 183
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +2
Query: 512 VLDSGDGVSHTVPIYEGYALPHAILRLDFS 601
V D GDGVSHTVP+Y+GY LPHA R+D +
Sbjct: 2197 VFDCGDGVSHTVPVYDGYWLPHATQRIDLA 2226
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 102 bits (244), Expect = 3e-22
Identities = 47/92 (51%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Frame = +3
Query: 240 QKRYPT-LKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREK 413
Q RY + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREK
Sbjct: 63 QLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREK 122
Query: 414 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 509
M ++MFE + +Y+AIQAVL+LYA G TG
Sbjct: 123 MIEVMFENYQFEGVYIAIQAVLTLYAQGLLTG 154
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +1
Query: 76 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 249
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 250 ILPSNTP 270
+L N P
Sbjct: 67 MLEVNYP 73
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +2
Query: 509 IVLDSGDGVSHTVPIYEGYALPHAILRLDFS 601
+V+DSGDGV+H P+YEG+ALPH RLD +
Sbjct: 155 VVIDSGDGVTHICPVYEGFALPHLTRRLDIA 185
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 87.0 bits (206), Expect = 1e-17
Identities = 36/51 (70%), Positives = 46/51 (90%)
Frame = +3
Query: 357 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 509
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTG 176
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/37 (62%), Positives = 31/37 (83%)
Frame = +2
Query: 509 IVLDSGDGVSHTVPIYEGYALPHAILRLDFSPVATSR 619
+VLD+GDGVSH+VPIYEG+A+PH+I+R D + SR
Sbjct: 177 VVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSR 213
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 74.1 bits (174), Expect = 8e-14
Identities = 30/81 (37%), Positives = 53/81 (65%)
Frame = +3
Query: 267 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 446
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 447 PAMYVAIQAVLSLYASGRTTG 509
PA ++ +VL+ +A+GR+ G
Sbjct: 63 PAFFLCKNSVLTAFANGRSNG 83
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 509 IVLDSGDGVSHTVPIYEGYALPHAILRLDFSPVA 610
+V+DSG + VP+++GY L AI+R SP+A
Sbjct: 84 LVIDSGATQTSAVPVHDGYVLQQAIVR---SPLA 114
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 61.3 bits (142), Expect = 6e-10
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +2
Query: 509 IVLDSGDGVSHTVPIYEGYALPHAILRLDFS 601
+V DSGDGVSH VPIYEGYALPHAILRLD +
Sbjct: 30 VVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Score = 57.6 bits (133), Expect = 8e-09
Identities = 35/70 (50%), Positives = 39/70 (55%)
Frame = +3
Query: 423 IMFETFNTPAMYVAIQAVLSLYASGRTTGSCWTPATVSPTPCPSTKDTHSPTPSCVWTLA 602
IMFE FN+PA+YVAIQAVLSLYASGRTTG + P + P LA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 603 RSRPPDYLMK 632
DYLMK
Sbjct: 61 GRDLTDYLMK 70
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 67 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 183
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +1
Query: 52 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 222
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 223 GDEAQSKRGILPSN 264
GD A +K G++ N
Sbjct: 753 GDAAVAKSGVMHLN 766
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +3
Query: 237 EQKRYPTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 374
++ Y T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 292 DKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 28.3 bits (60), Expect = 5.5
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +2
Query: 512 VLDSGDGVSHTVPI 553
V+DSGDGV+H +P+
Sbjct: 359 VIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 180 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 64
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 35.9 bits (79), Expect = 0.027
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 512 VLDSGDGVSHTVPIYEGYALPHAI 583
V+DSGDGV+H +P+ EGY + I
Sbjct: 65 VIDSGDGVTHVIPVAEGYVIGSCI 88
>SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073)
Length = 863
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +3
Query: 435 TFNTPAMYVAIQAVLSLYASGRTTGSCWTPATVSPTPCPSTKDTHSPTPSCVWTLARSRP 614
T++ A Y+ I ++ +S + S +T+SPT S+ T SP+ S T A S P
Sbjct: 126 TYSVIANYIIIIIIIITSSSSSLSSSS---STISPTKLSSSSSTISPSQSSSTTAATSPP 182
Query: 615 P 617
P
Sbjct: 183 P 183
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 237 EQKRYPTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 338
E K Y L Y P + G + NWD ++IW +TF E
Sbjct: 280 ECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 70 EVAALVVDNGSGMCKAGFAGDDAPRAV 150
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.59
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 258 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 410
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 155 GNTARGASSPAKPALHIPEPLSTT 84
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 155 GNTARGASSPAKPALHIPEPLSTT 84
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 31.1 bits (67), Expect = 0.78
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = -3
Query: 361 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMG--YLRVGYLFCSVPHLLHKSPSVPYRPS 188
CS + + C + ++V CS Y+ V + CS + H+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 187 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 95
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 31.1 bits (67), Expect = 0.78
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +1
Query: 463 PSKPCSRCTRPVVPPD 510
P++PCS CT+P +PP+
Sbjct: 220 PTEPCSLCTKPALPPE 235
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 155 GNTARGASSPAKPALHIPEPLSTT 84
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_35006| Best HMM Match : PT (HMM E-Value=3.4)
Length = 325
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -2
Query: 275 FDGVFEGRIPLLLCASSPT*ESFCPIPTITP*WRGLPT 162
+DGV + ++ LLL +SSP S PI TP +GL T
Sbjct: 273 YDGVIDIKLNLLLLSSSPMFLSAVPIAPHTPTLQGLHT 310
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 383 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 475
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 237 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 103
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 216 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 237 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 103
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 411 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 29.9 bits (64), Expect = 1.8
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = -1
Query: 243 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 79
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 78 GNFFVAHLELVK 43
G V L+ K
Sbjct: 521 GQVDVLLLDFQK 532
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 237 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 103
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 274 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 237 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 103
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 252 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_43322| Best HMM Match : Peptidase_S9 (HMM E-Value=0.032)
Length = 216
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 440 QHARHVRRHPSRALAVRVRSYHRIVLDSGDGVSHTVPIYEG 562
QH RHV S ++ S + V D D + +P YEG
Sbjct: 25 QHERHVGHGKSEGERAQIDSLQKYVRDIFDHIDQIIPKYEG 65
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 237 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 103
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 237 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 103
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 237 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 103
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 128 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_19798| Best HMM Match : Calx-beta (HMM E-Value=6.3e-12)
Length = 185
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 417 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGSCWTPATVSPTPCPSTKDTHSP 575
T I F+ + P A A L L SG +G ATV+P + D +SP
Sbjct: 26 TYIGFDLSDVPVPESAGTATLGLTRSGDVSGESLVTATVTPLTATAGTDYNSP 78
>SB_50702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 823
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = +2
Query: 404 QREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRIVLDSGDGVSHTVPIYEGYALPHAI 583
+ E+DP I+H R + R R + V + + +VLD G G S PI A+
Sbjct: 153 KNEEDP-----IKHLREIVRETGRISSEEVFNDYFVVLDDGKGGSKKEPIKADKPATEAV 207
Query: 584 LRLDFSPVATSRLPYE 631
L +P S YE
Sbjct: 208 -TLPVNPAKPSHPNYE 222
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -1
Query: 237 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 103
+C ++LSH + H M D +HG RS SCET L T
Sbjct: 176 ICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 435 TFNTPAMYVAIQAVLSLYASGRTTGSCWTPATVSPTPCPSTKDTHSPTPS 584
T TP++ + QA S+ S T S + V+P+ ST+ S TPS
Sbjct: 1840 THLTPSVASSTQAASSVILSAEVTTSVTSSTQVTPSVASSTQAATSVTPS 1889
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +3
Query: 375 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGSCWTPATVSPTPCPS 554
T+ + ++ + T + T P++ + Q S+ +S + T S + +P+ PS
Sbjct: 1870 TQVTPSVASSTQAATSVTPSTQGMPSVAPSTQMTPSVASSTQVTPSVASSTQAAPSVTPS 1929
Query: 555 TKDTHSPTPS 584
T T S TPS
Sbjct: 1930 TLMTPSVTPS 1939
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -1
Query: 600 LKSRRRMAWGSAYPS*MGTVWETPSPESSTIRW 502
L + +W S P T W +PSP+ T W
Sbjct: 106 LPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSW 138
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +3
Query: 342 RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGSCWT 521
++A + +P + E N K + +K+ Q M +T + + ++ +A W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMT---LLYNMPKIMRKFAFELPN---WA 919
Query: 522 PATVSPTPCPSTKDTHSP-TPSCV 590
P PT P+ K T +P TPS V
Sbjct: 920 PKIPLPTEPPTEKMTEAPTTPSAV 943
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 155 GNTARGASSPAKPALHIPEPLSTT 84
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 155 GNTARGASSPAKPALHIPEPLSTT 84
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_53299| Best HMM Match : DUF1685 (HMM E-Value=0.67)
Length = 174
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 447 PAMYVAIQAVLSLYASGRTTGSCWTPATVSPTPCPSTKDTHSPTPSCVWTLARSRPPD 620
P V ++ + + A+G G VS T PS + +P+PS T PPD
Sbjct: 78 PGNTVDLKPLEDMIATGSLAGQTVNRNFVSTTYAPSPSTSPTPSPSSETTTKPVPPPD 135
>SB_38004| Best HMM Match : CXCXC (HMM E-Value=5.5e-08)
Length = 240
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 501 TTGSCWTPATVSPTPCPSTKDTHSPT 578
TT SC P T +PT P+ T +PT
Sbjct: 199 TTCSCVEPPTQAPTQAPTQAPTQAPT 224
>SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3762
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 495 GRTTGSCWTPATVSPTPCPSTKDTHSPTPSCVW 593
G+TTG+ + PA+ SP + + TP W
Sbjct: 853 GQTTGTQFAPASASPAAAAAAAAASAITPQSFW 885
>SB_377| Best HMM Match : IQ (HMM E-Value=0.0002)
Length = 1376
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 501 TTGSCWTPATVSPTPCPSTKDTHSPTPSCVWTLARS 608
T G C + SPTP +T+D + +W++ R+
Sbjct: 50 TVGDCGKDSEESPTPARNTEDRIGVSTDQMWSIMRA 85
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 237 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 103
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 245 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 170 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 60
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_8849| Best HMM Match : F-box (HMM E-Value=0.86)
Length = 1222
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 127 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILPSNTPSNT 279
GDD P A + R Q ++ G+G+ D D +K +P+ TP +T
Sbjct: 701 GDDRP-ATSGTATSRSTLQSLIHGVGEIDVKDQDSDHNKSSEMPTETPLST 750
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 237 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 103
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 106 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 237 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 103
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 1644 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 237 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 103
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 672 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 237 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 103
LC + ++LSH + H L +HG R +SCET L T
Sbjct: 857 LCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -3
Query: 226 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 80
LL +S P +P+ RP GGA P++ ++ + N+ T+ PT
Sbjct: 92 LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142
>SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8)
Length = 361
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 439 STRPPCTSPSKPCSRCTRPVVPPDRAGLRR 528
+TRP TS +KP + T+P PP +A R
Sbjct: 31 ATRPTSTS-TKPTTASTKPTSPPSQAARTR 59
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 443 HARHVRRHPSRALAVRVRSYHRIVLDSGDGVSHTVPI 553
+ARH R PSR +R+ Y D DG++ ++ I
Sbjct: 42 NARHPRVEPSRCRGLRLLDYCSDKFDDDDGLTDSLDI 78
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -3
Query: 232 PHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 62
P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 237 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 103
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 227 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_12805| Best HMM Match : LicD (HMM E-Value=9.7e-06)
Length = 371
Score = 27.5 bits (58), Expect = 9.6
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 321 HTFYNELRVA-PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 497
+TF +++ VA P+ LL +A R IM +T T Y A A+ + A+
Sbjct: 113 NTFDDDIDVAVPKRDFALLVDA-----LQRHLPDDIMLQTEETDPNYSA-PALSCMTAAL 166
Query: 498 RTTGSCWTPATVSPTPCP 551
R T SC+T + CP
Sbjct: 167 RDTRSCYTSIPCEDSECP 184
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 237 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 103
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 1082 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 237 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 103
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 25 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 237 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 103
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 106 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,306,661
Number of Sequences: 59808
Number of extensions: 627713
Number of successful extensions: 2507
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 2116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2474
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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