Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0615
(633 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 0.81
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 0.81
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 0.81
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 0.81
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 2.5
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 22 5.7
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 5.7
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 21 7.5
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 21 7.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 9.9
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 9.9
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 24.6 bits (51), Expect = 0.81
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +3
Query: 495 GRTTGSCWTP-ATVSPTPCPSTKDTHSPTPSCVWTLARSRPP 617
G TG+ P V+ T C TH+ T C L + PP
Sbjct: 412 GPPTGATTGPNEIVTCTNCGPNPCTHTTTNGCTAELRKKEPP 453
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 24.6 bits (51), Expect = 0.81
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +3
Query: 495 GRTTGSCWTP-ATVSPTPCPSTKDTHSPTPSCVWTLARSRPP 617
G TG+ P V+ T C TH+ T C L + PP
Sbjct: 398 GPPTGATTGPNEIVTCTNCGPNPCTHTTTNGCTAELRKKEPP 439
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 24.6 bits (51), Expect = 0.81
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +3
Query: 495 GRTTGSCWTP-ATVSPTPCPSTKDTHSPTPSCVWTLARSRPP 617
G TG+ P V+ T C TH+ T C L + PP
Sbjct: 432 GPPTGATTGPNEIVTCTNCGPNPCTHTTTNGCTAELRKKEPP 473
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 24.6 bits (51), Expect = 0.81
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +3
Query: 495 GRTTGSCWTP-ATVSPTPCPSTKDTHSPTPSCVWTLARSRPP 617
G TG+ P V+ T C TH+ T C L + PP
Sbjct: 381 GPPTGATTGPNEIVTCTNCGPNPCTHTTTNGCTAELRKKEPP 422
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.0 bits (47), Expect = 2.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 339 LRVAPEEHPVLLTEAPLNPKANREKM 416
LR+ P H V+ T +NP + EK+
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.7
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = -3
Query: 616 GGRDRAK-VQTQDGVGECVSFVDGHGVGDTVAGVQHDPVVRPDAYSESTAWMATYMAGV 443
G RD K + T +C + G+G+ AG+ + R A T + + GV
Sbjct: 94 GHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGVKQLIVGV 152
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 484 CTRPVVPPDRAGLRRRCLPHRAH 552
C+ V+ DR GLR L R H
Sbjct: 341 CSVVVIAADRPGLRNTELVERMH 363
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.4 bits (43), Expect = 7.5
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +2
Query: 254 YPQIPHRTRNRH 289
YPQ+P+ +N H
Sbjct: 142 YPQVPYTVKNFH 153
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 21.4 bits (43), Expect = 7.5
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 103 GMCKAGFAGD 132
GMCK G +GD
Sbjct: 130 GMCKEGISGD 139
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -1
Query: 162 DRGEHGARSIISCETGLA 109
D GEH ++ E GLA
Sbjct: 130 DPGEHNGDTVTDVEAGLA 147
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -1
Query: 162 DRGEHGARSIISCETGLA 109
D GEH ++ E GLA
Sbjct: 125 DPGEHNGDTVTDVEAGLA 142
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,867
Number of Sequences: 438
Number of extensions: 5166
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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