BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0615 (633 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 0.81 DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 0.81 DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 0.81 DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 0.81 AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 2.5 X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 22 5.7 AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 5.7 AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 21 7.5 AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 21 7.5 AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 9.9 AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 9.9 >DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride channel variant 4 protein. Length = 489 Score = 24.6 bits (51), Expect = 0.81 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Frame = +3 Query: 495 GRTTGSCWTP-ATVSPTPCPSTKDTHSPTPSCVWTLARSRPP 617 G TG+ P V+ T C TH+ T C L + PP Sbjct: 412 GPPTGATTGPNEIVTCTNCGPNPCTHTTTNGCTAELRKKEPP 453 >DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride channel variant 3 protein. Length = 475 Score = 24.6 bits (51), Expect = 0.81 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Frame = +3 Query: 495 GRTTGSCWTP-ATVSPTPCPSTKDTHSPTPSCVWTLARSRPP 617 G TG+ P V+ T C TH+ T C L + PP Sbjct: 398 GPPTGATTGPNEIVTCTNCGPNPCTHTTTNGCTAELRKKEPP 439 >DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride channel variant 1 protein. Length = 509 Score = 24.6 bits (51), Expect = 0.81 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Frame = +3 Query: 495 GRTTGSCWTP-ATVSPTPCPSTKDTHSPTPSCVWTLARSRPP 617 G TG+ P V+ T C TH+ T C L + PP Sbjct: 432 GPPTGATTGPNEIVTCTNCGPNPCTHTTTNGCTAELRKKEPP 473 >DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride channel protein. Length = 458 Score = 24.6 bits (51), Expect = 0.81 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Frame = +3 Query: 495 GRTTGSCWTP-ATVSPTPCPSTKDTHSPTPSCVWTLARSRPP 617 G TG+ P V+ T C TH+ T C L + PP Sbjct: 381 GPPTGATTGPNEIVTCTNCGPNPCTHTTTNGCTAELRKKEPP 422 >AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor protein. Length = 1770 Score = 23.0 bits (47), Expect = 2.5 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = +3 Query: 339 LRVAPEEHPVLLTEAPLNPKANREKM 416 LR+ P H V+ T +NP + EK+ Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486 >X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha protein. Length = 461 Score = 21.8 bits (44), Expect = 5.7 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 1/59 (1%) Frame = -3 Query: 616 GGRDRAK-VQTQDGVGECVSFVDGHGVGDTVAGVQHDPVVRPDAYSESTAWMATYMAGV 443 G RD K + T +C + G+G+ AG+ + R A T + + GV Sbjct: 94 GHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGVKQLIVGV 152 >AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein 75 protein. Length = 900 Score = 21.8 bits (44), Expect = 5.7 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = +1 Query: 484 CTRPVVPPDRAGLRRRCLPHRAH 552 C+ V+ DR GLR L R H Sbjct: 341 CSVVVIAADRPGLRNTELVERMH 363 >AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. Length = 493 Score = 21.4 bits (43), Expect = 7.5 Identities = 6/12 (50%), Positives = 9/12 (75%) Frame = +2 Query: 254 YPQIPHRTRNRH 289 YPQ+P+ +N H Sbjct: 142 YPQVPYTVKNFH 153 >AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C protein. Length = 149 Score = 21.4 bits (43), Expect = 7.5 Identities = 7/10 (70%), Positives = 8/10 (80%) Frame = +1 Query: 103 GMCKAGFAGD 132 GMCK G +GD Sbjct: 130 GMCKEGISGD 139 >AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein protein. Length = 1124 Score = 21.0 bits (42), Expect = 9.9 Identities = 8/18 (44%), Positives = 10/18 (55%) Frame = -1 Query: 162 DRGEHGARSIISCETGLA 109 D GEH ++ E GLA Sbjct: 130 DPGEHNGDTVTDVEAGLA 147 >AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. Length = 289 Score = 21.0 bits (42), Expect = 9.9 Identities = 8/18 (44%), Positives = 10/18 (55%) Frame = -1 Query: 162 DRGEHGARSIISCETGLA 109 D GEH ++ E GLA Sbjct: 125 DPGEHNGDTVTDVEAGLA 142 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 206,867 Number of Sequences: 438 Number of extensions: 5166 Number of successful extensions: 13 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 18949215 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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