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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0615
         (633 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    25   0.81 
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    25   0.81 
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    25   0.81 
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    25   0.81 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.5  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    22   5.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   5.7  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   7.5  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   7.5  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   9.9  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             21   9.9  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
 Frame = +3

Query: 495 GRTTGSCWTP-ATVSPTPCPSTKDTHSPTPSCVWTLARSRPP 617
           G  TG+   P   V+ T C     TH+ T  C   L +  PP
Sbjct: 412 GPPTGATTGPNEIVTCTNCGPNPCTHTTTNGCTAELRKKEPP 453


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
 Frame = +3

Query: 495 GRTTGSCWTP-ATVSPTPCPSTKDTHSPTPSCVWTLARSRPP 617
           G  TG+   P   V+ T C     TH+ T  C   L +  PP
Sbjct: 398 GPPTGATTGPNEIVTCTNCGPNPCTHTTTNGCTAELRKKEPP 439


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
 Frame = +3

Query: 495 GRTTGSCWTP-ATVSPTPCPSTKDTHSPTPSCVWTLARSRPP 617
           G  TG+   P   V+ T C     TH+ T  C   L +  PP
Sbjct: 432 GPPTGATTGPNEIVTCTNCGPNPCTHTTTNGCTAELRKKEPP 473


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
 Frame = +3

Query: 495 GRTTGSCWTP-ATVSPTPCPSTKDTHSPTPSCVWTLARSRPP 617
           G  TG+   P   V+ T C     TH+ T  C   L +  PP
Sbjct: 381 GPPTGATTGPNEIVTCTNCGPNPCTHTTTNGCTAELRKKEPP 422


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 339  LRVAPEEHPVLLTEAPLNPKANREKM 416
            LR+ P  H V+ T   +NP  + EK+
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
 Frame = -3

Query: 616 GGRDRAK-VQTQDGVGECVSFVDGHGVGDTVAGVQHDPVVRPDAYSESTAWMATYMAGV 443
           G RD  K + T     +C   +   G+G+  AG+  +   R  A    T  +   + GV
Sbjct: 94  GHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGVKQLIVGV 152


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 484 CTRPVVPPDRAGLRRRCLPHRAH 552
           C+  V+  DR GLR   L  R H
Sbjct: 341 CSVVVIAADRPGLRNTELVERMH 363


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 254 YPQIPHRTRNRH 289
           YPQ+P+  +N H
Sbjct: 142 YPQVPYTVKNFH 153


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 103 GMCKAGFAGD 132
           GMCK G +GD
Sbjct: 130 GMCKEGISGD 139


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 162 DRGEHGARSIISCETGLA 109
           D GEH   ++   E GLA
Sbjct: 130 DPGEHNGDTVTDVEAGLA 147


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 162 DRGEHGARSIISCETGLA 109
           D GEH   ++   E GLA
Sbjct: 125 DPGEHNGDTVTDVEAGLA 142


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,867
Number of Sequences: 438
Number of extensions: 5166
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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