Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0615
(633 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 186 1e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 185 2e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 185 2e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 184 6e-47
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 184 6e-47
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 184 6e-47
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 184 6e-47
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 183 1e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 183 1e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 166 9e-42
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 162 2e-40
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 161 5e-40
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 113 7e-26
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 101 4e-22
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 89 3e-18
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 74 7e-14
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 3e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 59 3e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 54 6e-08
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 35 0.039
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 35 0.039
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.090
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 32 0.36
At1g16690.2 68414.m01999 transcription factor-related similar to... 30 1.1
At1g16690.1 68414.m01998 transcription factor-related similar to... 30 1.1
At5g29020.1 68418.m03592 hypothetical protein 28 4.5
At3g28790.1 68416.m03593 expressed protein 28 4.5
At2g23300.1 68415.m02781 leucine-rich repeat transmembrane prote... 28 4.5
At5g07760.1 68418.m00888 formin homology 2 domain-containing pro... 28 5.9
At4g37250.1 68417.m05273 leucine-rich repeat family protein / pr... 28 5.9
At4g20020.2 68417.m02930 expressed protein 28 5.9
At4g20020.1 68417.m02931 expressed protein 28 5.9
At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identic... 28 5.9
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.8
At2g23480.1 68415.m02803 hypothetical protein contains Pfam prof... 27 7.8
At1g23080.2 68414.m02886 auxin efflux carrier protein, putative ... 27 7.8
At1g23080.1 68414.m02885 auxin efflux carrier protein, putative ... 27 7.8
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 186 bits (452), Expect = 1e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 434
TLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 68 TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 127
Query: 435 TFNTPAMYVAIQAVLSLYASGRTTG 509
TFNTPAMYVAIQAVLSLYASGRTTG
Sbjct: 128 TFNTPAMYVAIQAVLSLYASGRTTG 152
Score = 119 bits (286), Expect = 2e-27
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = +1
Query: 67 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 246
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 247 GILPSNTP 270
GIL P
Sbjct: 65 GILTLKYP 72
Score = 65.3 bits (152), Expect = 3e-11
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 509 IVLDSGDGVSHTVPIYEGYALPHAILRLDFS 601
IVLDSGDGVSHTVPIYEGYALPHAILRLD +
Sbjct: 153 IVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 185 bits (451), Expect = 2e-47
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 434
TLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 68 TLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 127
Query: 435 TFNTPAMYVAIQAVLSLYASGRTTG 509
TFNTPAMYVAIQAVLSLYASGRTTG
Sbjct: 128 TFNTPAMYVAIQAVLSLYASGRTTG 152
Score = 119 bits (286), Expect = 2e-27
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = +1
Query: 67 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 246
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 247 GILPSNTP 270
GIL P
Sbjct: 65 GILTLKYP 72
Score = 65.3 bits (152), Expect = 3e-11
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 509 IVLDSGDGVSHTVPIYEGYALPHAILRLDFS 601
IVLDSGDGVSHTVPIYEGYALPHAILRLD +
Sbjct: 153 IVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 185 bits (451), Expect = 2e-47
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 434
TLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 68 TLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 127
Query: 435 TFNTPAMYVAIQAVLSLYASGRTTG 509
TFNTPAMYVAIQAVLSLYASGRTTG
Sbjct: 128 TFNTPAMYVAIQAVLSLYASGRTTG 152
Score = 119 bits (286), Expect = 2e-27
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = +1
Query: 67 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 246
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 247 GILPSNTP 270
GIL P
Sbjct: 65 GILTLKYP 72
Score = 65.3 bits (152), Expect = 3e-11
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 509 IVLDSGDGVSHTVPIYEGYALPHAILRLDFS 601
IVLDSGDGVSHTVPIYEGYALPHAILRLD +
Sbjct: 153 IVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 184 bits (447), Expect = 6e-47
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 255 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 434
TLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 68 TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 127
Query: 435 TFNTPAMYVAIQAVLSLYASGRTTG 509
TFN PAMYVAIQAVLSLYASGRTTG
Sbjct: 128 TFNVPAMYVAIQAVLSLYASGRTTG 152
Score = 119 bits (286), Expect = 2e-27
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = +1
Query: 67 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 246
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 247 GILPSNTP 270
GIL P
Sbjct: 65 GILTLKYP 72
Score = 65.3 bits (152), Expect = 3e-11
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 509 IVLDSGDGVSHTVPIYEGYALPHAILRLDFS 601
IVLDSGDGVSHTVPIYEGYALPHAILRLD +
Sbjct: 153 IVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 184 bits (447), Expect = 6e-47
Identities = 90/126 (71%), Positives = 95/126 (75%)
Frame = +3
Query: 255 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 434
TLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 68 TLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFE 127
Query: 435 TFNTPAMYVAIQAVLSLYASGRTTGSCWTPATVSPTPCPSTKDTHSPTPSCVWTLARSRP 614
TFN+PAMYVAIQAVLSLYASGRTTG P + P LA
Sbjct: 128 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDL 187
Query: 615 PDYLMK 632
DYLMK
Sbjct: 188 TDYLMK 193
Score = 114 bits (275), Expect = 4e-26
Identities = 51/68 (75%), Positives = 58/68 (85%)
Frame = +1
Query: 67 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 246
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 247 GILPSNTP 270
GIL P
Sbjct: 65 GILTLKYP 72
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 184 bits (447), Expect = 6e-47
Identities = 90/126 (71%), Positives = 95/126 (75%)
Frame = +3
Query: 255 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 434
TLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 68 TLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFE 127
Query: 435 TFNTPAMYVAIQAVLSLYASGRTTGSCWTPATVSPTPCPSTKDTHSPTPSCVWTLARSRP 614
TFN+PAMYVAIQAVLSLYASGRTTG P + P LA
Sbjct: 128 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDL 187
Query: 615 PDYLMK 632
DYLMK
Sbjct: 188 TDYLMK 193
Score = 114 bits (275), Expect = 4e-26
Identities = 51/68 (75%), Positives = 58/68 (85%)
Frame = +1
Query: 67 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 246
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 247 GILPSNTP 270
GIL P
Sbjct: 65 GILTLKYP 72
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 184 bits (447), Expect = 6e-47
Identities = 90/126 (71%), Positives = 95/126 (75%)
Frame = +3
Query: 255 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 434
TLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 68 TLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFE 127
Query: 435 TFNTPAMYVAIQAVLSLYASGRTTGSCWTPATVSPTPCPSTKDTHSPTPSCVWTLARSRP 614
TFN+PAMYVAIQAVLSLYASGRTTG P + P LA
Sbjct: 128 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDL 187
Query: 615 PDYLMK 632
DYLMK
Sbjct: 188 TDYLMK 193
Score = 114 bits (275), Expect = 4e-26
Identities = 51/68 (75%), Positives = 58/68 (85%)
Frame = +1
Query: 67 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 246
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 247 GILPSNTP 270
GIL P
Sbjct: 65 GILTLKYP 72
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 183 bits (445), Expect = 1e-46
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 255 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 434
TLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFE
Sbjct: 68 TLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFE 127
Query: 435 TFNTPAMYVAIQAVLSLYASGRTTG 509
TFN PAMYVAIQAVLSLYASGRTTG
Sbjct: 128 TFNAPAMYVAIQAVLSLYASGRTTG 152
Score = 119 bits (286), Expect = 2e-27
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = +1
Query: 67 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 246
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 247 GILPSNTP 270
GIL P
Sbjct: 65 GILTLKYP 72
Score = 65.3 bits (152), Expect = 3e-11
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 509 IVLDSGDGVSHTVPIYEGYALPHAILRLDFS 601
IVLDSGDGVSHTVPIYEGYALPHAILRLD +
Sbjct: 153 IVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 183 bits (445), Expect = 1e-46
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 255 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 434
TLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFE
Sbjct: 68 TLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFE 127
Query: 435 TFNTPAMYVAIQAVLSLYASGRTTG 509
TFN PAMYVAIQAVLSLYASGRTTG
Sbjct: 128 TFNAPAMYVAIQAVLSLYASGRTTG 152
Score = 119 bits (286), Expect = 2e-27
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = +1
Query: 67 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 246
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 247 GILPSNTP 270
GIL P
Sbjct: 65 GILTLKYP 72
Score = 65.3 bits (152), Expect = 3e-11
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 509 IVLDSGDGVSHTVPIYEGYALPHAILRLDFS 601
IVLDSGDGVSHTVPIYEGYALPHAILRLD +
Sbjct: 153 IVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 166 bits (404), Expect = 9e-42
Identities = 71/85 (83%), Positives = 80/85 (94%)
Frame = +3
Query: 255 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 434
+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQIMFE
Sbjct: 69 SLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMFE 128
Query: 435 TFNTPAMYVAIQAVLSLYASGRTTG 509
+F P+MY+ IQAVLSLY+SGRTTG
Sbjct: 129 SFAFPSMYIGIQAVLSLYSSGRTTG 153
Score = 111 bits (266), Expect = 5e-25
Identities = 49/68 (72%), Positives = 59/68 (86%)
Frame = +1
Query: 67 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 246
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 247 GILPSNTP 270
GIL P
Sbjct: 66 GILSLKYP 73
Score = 65.3 bits (152), Expect = 3e-11
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 509 IVLDSGDGVSHTVPIYEGYALPHAILRLDFS 601
IVLDSGDGVSHTVPIYEGYALPHAILRLD +
Sbjct: 154 IVLDSGDGVSHTVPIYEGYALPHAILRLDLA 184
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 162 bits (394), Expect = 2e-40
Identities = 70/86 (81%), Positives = 81/86 (94%)
Frame = +3
Query: 255 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 434
TL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFE
Sbjct: 23 TLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQIMFE 82
Query: 435 TFNTPAMYVAIQAVLSLYASGRTTGS 512
TF P+MY+ +QA LSL+ASGRTTG+
Sbjct: 83 TFAVPSMYIGMQAALSLHASGRTTGT 108
Score = 55.2 bits (127), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +2
Query: 512 VLDSGDGVSHTVPIYEGYALPHAILRLDFS 601
VLDSGDGVS+ VPIYEG ALPHAILRLD +
Sbjct: 109 VLDSGDGVSYIVPIYEGSALPHAILRLDLA 138
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 190 MVGMGQKDSYVGDEAQSKRGILPSNTP 270
MVGM + D +VGD+A+++ GIL + P
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYP 27
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 161 bits (390), Expect = 5e-40
Identities = 76/108 (70%), Positives = 86/108 (79%)
Frame = +3
Query: 186 RDGRYGTEGLLCRR*GTEQKRYPTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 365
RDG E + G + TLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 366 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 509
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+SGRTTG
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTG 141
Score = 65.7 bits (153), Expect = 2e-11
Identities = 31/63 (49%), Positives = 40/63 (63%)
Frame = +1
Query: 82 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILPS 261
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R IL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 262 NTP 270
P
Sbjct: 59 KDP 61
Score = 55.2 bits (127), Expect = 3e-08
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +2
Query: 509 IVLDSGDGVSHTVPIYEGYALPHAILRLD 595
+VLD G+ VSHTVP+YEGYALPH ILRLD
Sbjct: 142 VVLDLGERVSHTVPVYEGYALPHGILRLD 170
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 113 bits (273), Expect = 7e-26
Identities = 47/92 (51%), Positives = 64/92 (69%)
Frame = +3
Query: 234 TEQKRYPTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 413
+E + + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 414 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 509
M + MFE +N +++ IQAVL+LYA G TG
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYAQGLLTG 151
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 82 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 255
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 256 PSNTP 270
N P
Sbjct: 67 DINYP 71
Score = 43.2 bits (97), Expect = 1e-04
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +2
Query: 509 IVLDSGDGVSHTVPIYEGYALPHAILRLD 595
+V+DSGDGV+H VP+ +GY+ PH R++
Sbjct: 152 LVIDSGDGVTHVVPVVDGYSFPHLTKRMN 180
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 101 bits (242), Expect = 4e-22
Identities = 45/86 (52%), Positives = 59/86 (68%)
Frame = +3
Query: 258 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 437
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 438 FNTPAMYVAIQAVLSLYASGRTTGSC 515
FN P +Y+A+ +VL+L A+G TT C
Sbjct: 146 FNVPGLYIAVNSVLAL-AAGYTTSKC 170
Score = 35.9 bits (79), Expect = 0.022
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 79 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 165
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
Score = 33.1 bits (72), Expect = 0.16
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 509 IVLDSGDGVSHTVPIYEGYALPHAI 583
+V+D GDG +H VP+ EGY + I
Sbjct: 175 VVVDVGDGATHVVPVAEGYVIGSCI 199
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 88.6 bits (210), Expect = 3e-18
Identities = 37/80 (46%), Positives = 55/80 (68%)
Frame = +3
Query: 267 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 446
PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK ++MFE +
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKV 153
Query: 447 PAMYVAIQAVLSLYASGRTT 506
PA+++A VL+ +A+GR T
Sbjct: 154 PALFMAKNPVLTSFATGRAT 173
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 67 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 168
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 74.1 bits (174), Expect = 7e-14
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +3
Query: 267 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 443
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 444 TPAMYVAIQAVLSLYASGRTTG 509
Y + QAVLSLYA GR +G
Sbjct: 117 VSGFYASEQAVLSLYAVGRISG 138
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 79 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 171
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.1 bits (144), Expect = 3e-10
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +3
Query: 267 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 413
P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 88 PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 58.4 bits (135), Expect = 4e-09
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = +1
Query: 67 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 246
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ + + E+ ++
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 247 G 249
G
Sbjct: 65 G 65
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +3
Query: 258 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 437
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 438 FNTPAMYVA-IQAVLSLYASGRTTGS 512
F ++Y+A Q+++ LY + R S
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDS 146
Score = 35.5 bits (78), Expect = 0.030
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 425 HVRNIQHARHVRRHPSRALAVRVRSYHRIVLDSGDGVSHTVPIYEGYALPHAILRLD 595
H +++ H R P L+ ++ +V+D G +H VP+ + L HAI R+D
Sbjct: 130 HPQSLVHLYEASRQPDSILS---KTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRID 183
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 82 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 174
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 54.4 bits (125), Expect = 6e-08
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +3
Query: 267 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 443
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 444 TPAMYVAIQAVLSLYASGRTTGSCWTPATVSPTPCPSTKDTHS 572
PA+ + A S Y + G C V CP THS
Sbjct: 145 VPAVAFGVDAAFS-YKYNQLHGICKKDGIVL---CPGFTTTHS 183
Score = 44.0 bits (99), Expect = 8e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 82 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 228
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 35.1 bits (77), Expect = 0.039
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Frame = +3
Query: 324 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 473
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 474 VLSLYASGRTTG 509
VL+LYA+ RT+G
Sbjct: 241 VLALYAARRTSG 252
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 35.1 bits (77), Expect = 0.039
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Frame = +3
Query: 324 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 473
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 474 VLSLYASGRTTG 509
VL+LYA+ RT+G
Sbjct: 241 VLALYAARRTSG 252
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.090
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 203 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 66
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 31.9 bits (69), Expect = 0.36
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 380 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRALAVRVRSYHRIVLDSGDG 532
GSP+ +G + E+D D + NI+H + +H + A+ SY R D +G
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLYGKMSYGRGPEDDENG 144
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 237 EQKRYPTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 413
E +Y ++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 237 EQKRYPTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 413
E +Y ++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g29020.1 68418.m03592 hypothetical protein
Length = 847
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 457 TSPSKPCSRCTRPVVPP-DRAGLRRRCLPHRAHLRRIRTPPRHPASGL 597
++P+KPC T PV PP G R+R P + R + P P+ L
Sbjct: 26 SNPAKPCGSRTLPVNPPYPTTGKRKRADPPKPS-RGLSPNPTDPSGVL 72
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 501 TTGSC-WTPATVSPTPCPSTKDTHSPTPS 584
TTGS + SPTP PST +PTPS
Sbjct: 266 TTGSSSGASPSGSPTPTPSTPTPSTPTPS 294
>At2g23300.1 68415.m02781 leucine-rich repeat transmembrane protein
kinase, putative
Length = 773
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 483 LYASGRTTGSCWTPATVSPTPCPSTKDTHSPTPSCVWTLARSRPPD 620
+++S R T S T+ PTP PS +P C R+ P+
Sbjct: 622 IFSSKRLTASSREFGTIGPTPSPSPSSVGPISPYCAPESLRNLKPN 667
>At5g07760.1 68418.m00888 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 853
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 445 RPPCTSPSKPCSRCTRPVVPPDRAGLRRRCLP 540
R P P P R P+ PP +RRR LP
Sbjct: 37 RAPLPPPPPPPMRRRAPLPPPPPPAMRRRVLP 68
>At4g37250.1 68417.m05273 leucine-rich repeat family protein /
protein kinase family protein contains protein kinase
domain, Pfam:PF00069; contains leucine-rich repeats,
Pfam:PF00560
Length = 768
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +3
Query: 456 YVAIQAVLSLYASGRTTGSCWTPATVSPTPCPSTKDTHSPTPSCVWTLARSRPP 617
Y+ +++S R T S +++ PTP PS + +P C RS P
Sbjct: 608 YIRAGGSSRIFSSKRYTTSSREFSSIGPTPSPSPSSVGAMSPYCAPESFRSLKP 661
>At4g20020.2 68417.m02930 expressed protein
Length = 406
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 461 RHPSRALAVRVRSYHRIVLDSGDGVSHTVPIYEGYALPHAILRLDFSPVATSRLPYE 631
R P+R + R ++ GD ++ ++EG H ++ +DFS T + P E
Sbjct: 55 RAPARLFSTRQYKLYK----EGDEITEDTVLFEGCDYNHWLITMDFSKEETPKSPEE 107
>At4g20020.1 68417.m02931 expressed protein
Length = 419
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 461 RHPSRALAVRVRSYHRIVLDSGDGVSHTVPIYEGYALPHAILRLDFSPVATSRLPYE 631
R P+R + R ++ GD ++ ++EG H ++ +DFS T + P E
Sbjct: 55 RAPARLFSTRQYKLYK----EGDEITEDTVLFEGCDYNHWLITMDFSKEETPKSPEE 107
>At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identical
to gi|10880497|gb|AAG24278; supported by Ceres cDNA
265772
Length = 127
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 522 PATVSPTPCPSTKDTHSPTPSCVWTLARSRPP 617
P T +PTP S T +PTPS T A PP
Sbjct: 40 PRTAAPTP--SITPTPTPTPSATPTAAPVSPP 69
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 179 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 57
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At2g23480.1 68415.m02803 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 705
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = +3
Query: 378 EAPLNPKANREKM-TQIMFETFNTPAMYVAIQAVLSLYASGRTTGSCW----TPATVSPT 542
+A + A +EK+ E PA +QA A+ +TT + P T +PT
Sbjct: 42 KAKVQAPAKKEKVQAPAKKEKVQAPAKKAKVQATAKTTATAQTTATAMATTAAPTTTAPT 101
Query: 543 PCPSTK 560
P+T+
Sbjct: 102 TAPTTE 107
>At1g23080.2 68414.m02886 auxin efflux carrier protein, putative
similar to efflux carrier of polar auxin transport
[Brassica juncea] gi|12331173|emb|CAC24691
Length = 527
Score = 27.5 bits (58), Expect = 7.8
Identities = 23/67 (34%), Positives = 30/67 (44%)
Frame = +1
Query: 127 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILPSNTPSNTESSLTGMTW 306
G + + F S++G P G + G D Y QS RG P+ PSN E S +
Sbjct: 245 GSNFNHSDFYSMMGFPG--GRLSNFGPADMY---SVQSSRG--PTPRPSNFEESCAMASS 297
Query: 307 RRFGIIP 327
RFG P
Sbjct: 298 PRFGYYP 304
>At1g23080.1 68414.m02885 auxin efflux carrier protein, putative
similar to efflux carrier of polar auxin transport
[Brassica juncea] gi|12331173|emb|CAC24691
Length = 619
Score = 27.5 bits (58), Expect = 7.8
Identities = 23/67 (34%), Positives = 30/67 (44%)
Frame = +1
Query: 127 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILPSNTPSNTESSLTGMTW 306
G + + F S++G P G + G D Y QS RG P+ PSN E S +
Sbjct: 245 GSNFNHSDFYSMMGFPG--GRLSNFGPADMY---SVQSSRG--PTPRPSNFEESCAMASS 297
Query: 307 RRFGIIP 327
RFG P
Sbjct: 298 PRFGYYP 304
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,536,275
Number of Sequences: 28952
Number of extensions: 414306
Number of successful extensions: 1557
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1541
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1295224128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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