Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0614
         (579 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q182E0 Cluster: Putative uncharacterized protein; n=2; ...    36   0.69 
UniRef50_Q4UA59 Cluster: SfiI-subtelomeric related protein famil...    35   1.2  
UniRef50_Q1FGN9 Cluster: Binding-protein-dependent transport sys...    34   2.1  
UniRef50_A0YWU0 Cluster: TPR repeat protein; n=1; Lyngbya sp. PC...    34   2.1  
UniRef50_A6DKU8 Cluster: Putative uncharacterized protein; n=1; ...    33   4.9  
UniRef50_Q8IKL0 Cluster: Putative uncharacterized protein; n=1; ...    33   4.9  
UniRef50_A5K226 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_A5KBA1 Cluster: WD domain, G-beta repeat domain contain...    32   8.5  

>UniRef50_Q182E0 Cluster: Putative uncharacterized protein; n=2;
           Clostridium difficile|Rep: Putative uncharacterized
           protein - Clostridium difficile (strain 630)
          Length = 491

 Score = 35.9 bits (79), Expect = 0.69
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -3

Query: 229 LCFEKFFTTFFSRLYGNTNFGQIL---RELRQS*LLQYKLFCSYRLYTPKSFYSSCINRK 59
           +CFE  F      LY N     +     +LR+   L +K+    ++Y+ KSFY   ++ K
Sbjct: 226 ICFECEFFNLMCLLYINLKRPMVFAYTNDLRELAFLNHKIMLKRKMYSDKSFYKKLLHEK 285

Query: 58  ISII 47
           IS I
Sbjct: 286 ISSI 289


>UniRef50_Q4UA59 Cluster: SfiI-subtelomeric related protein family
           member, putative; n=1; Theileria annulata|Rep:
           SfiI-subtelomeric related protein family member,
           putative - Theileria annulata
          Length = 529

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
 Frame = +1

Query: 52  LKFYDLYN*NKNFLEYKVDNYKKVCIVEVNFDAVRAEFDQNLCFRI----DAKKRL*KTF 219
           L F D  N + N+L+  V+ Y+ + ++E  F+  +  FD  LC+ +    +  K L    
Sbjct: 47  LLFTDSNNKDYNYLQCSVELYELILVIEFGFNCKKVWFDSKLCWTLTNSQEYPKFLGLHL 106

Query: 220 RNKGLFCTFS-LRSEIV 267
           R   +F  FS LR E++
Sbjct: 107 RTNQIFLMFSKLRLELL 123


>UniRef50_Q1FGN9 Cluster: Binding-protein-dependent transport
           systems inner membrane component; n=1; Clostridium
           phytofermentans ISDg|Rep: Binding-protein-dependent
           transport systems inner membrane component - Clostridium
           phytofermentans ISDg
          Length = 197

 Score = 34.3 bits (75), Expect = 2.1
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = -1

Query: 273 FEHNFATQRKCTKQSFVSKSFLQPFFRVYTETQILVKFCANCVKVNFYNTNFFVV 109
           F  N+      T Q +++ +FL+  ++    + +L       + VNFYNTNF  V
Sbjct: 140 FSTNYPPNHSYTLQYYMNNNFLKLDYQSLATSAVLTSVLVFVIVVNFYNTNFNTV 194


>UniRef50_A0YWU0 Cluster: TPR repeat protein; n=1; Lyngbya sp. PCC
           8106|Rep: TPR repeat protein - Lyngbya sp. PCC 8106
          Length = 877

 Score = 34.3 bits (75), Expect = 2.1
 Identities = 21/80 (26%), Positives = 41/80 (51%)
 Frame = +2

Query: 323 QLVRKQTDHRTINKKATTSVIEL*NRKDFGNIFKSLRELFIS*PKIHSEFVDLIYSCYSG 502
           Q  ++QTD    N +     +E    +  G I + +RE + +  ++ +EF++ +    SG
Sbjct: 365 QKAKQQTDEMLANFENYGGELEAQLSEAQGKIQERVREKYNTLKQLEAEFIEQVKQAQSG 424

Query: 503 SVPKKHQEIRIKSGLSVEFV 562
              +K+Q+I+    L+ EFV
Sbjct: 425 VETQKNQQIQNFQQLTTEFV 444


>UniRef50_A6DKU8 Cluster: Putative uncharacterized protein; n=1;
           Lentisphaera araneosa HTCC2155|Rep: Putative
           uncharacterized protein - Lentisphaera araneosa HTCC2155
          Length = 874

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 21/80 (26%), Positives = 43/80 (53%)
 Frame = -2

Query: 371 LLFCLSFGDQFVSELVGQEAILLPLQI*AKTVILNTISLRSENVQNSPLFRKVFYNLFFA 192
           +L  +S+GD+F+ ++    A++L LQ  AK   L++ ++   + Q  P F +  YN    
Sbjct: 741 VLATVSYGDEFLYDMPSDPAVILSLQPVAKGSHLSSFTVSKSDAQIIPAFTQ--YNA--P 796

Query: 191 SIRKHKFWSNSARTASKLTS 132
           ++   + WS  + + S L++
Sbjct: 797 ALADKRLWSFDSLSESVLSN 816


>UniRef50_Q8IKL0 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 3322

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = +1

Query: 73  N*NKNFLEYKVDNYKKVCIVEVNFDAVRAEFDQNLCFRIDAKKRL*KTFRNKGLFCTFS 249
           N N N      +NY+K    ++N +  +++ +QN   R++  K   K F NK +F   S
Sbjct: 427 NNNNNNKNNSNNNYEKYYNYKLNNNLFKSDVNQNYSSRLNINKNFPKNFNNKKIFTNMS 485


>UniRef50_A5K226 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1414

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = -2

Query: 284 KTVILNTISLRSENVQNSPLFRKVFYNLFFASIRKHKFWSNSARTASK 141
           K +ILN + +  E ++N  L R  F+ +    +R H    N   T  K
Sbjct: 193 KNIILNILKIEDEGIENLILLRSAFFTILVCYLRNHIIRMNKIYTKIK 240


>UniRef50_A5KBA1 Cluster: WD domain, G-beta repeat domain containing
           protein; n=1; Plasmodium vivax|Rep: WD domain, G-beta
           repeat domain containing protein - Plasmodium vivax
          Length = 498

 Score = 32.3 bits (70), Expect = 8.5
 Identities = 22/85 (25%), Positives = 41/85 (48%)
 Frame = -2

Query: 419 RCFQNPCDFIVQLLRSLLFCLSFGDQFVSELVGQEAILLPLQI*AKTVILNTISLRSENV 240
           +CFQ   D + +L RS+  C  F  +++S   G +  +   +   K V++NT+S  ++ V
Sbjct: 418 QCFQT-ID-VEELPRSI--CFDFSGKYLSLAAGNDVHVFNFEAKTKAVLVNTLSAHTDAV 473

Query: 239 QNSPLFRKVFYNLFFASIRKHKFWS 165
             +    +  Y L  +  +  K WS
Sbjct: 474 TQTCFGSRTAYLLSSSMDKTVKVWS 498


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,763,379
Number of Sequences: 1657284
Number of extensions: 9804506
Number of successful extensions: 25570
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25562
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)