Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0614
(579 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024881-9|AAK71410.1| 588|Caenorhabditis elegans Hypothetical ... 31 0.78
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 30 1.4
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 30 1.4
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 30 1.4
AY314779-1|AAQ84886.1| 454|Caenorhabditis elegans secretin rece... 28 4.2
AL031620-2|CAA20927.2| 454|Caenorhabditis elegans Hypothetical ... 28 4.2
Z68012-1|CAA92016.1| 304|Caenorhabditis elegans Hypothetical pr... 28 5.5
AC006693-10|AAF60376.1| 578|Caenorhabditis elegans Hypothetical... 27 7.3
Z74039-1|CAA98503.1| 451|Caenorhabditis elegans Hypothetical pr... 27 9.6
>AC024881-9|AAK71410.1| 588|Caenorhabditis elegans Hypothetical
protein Y97E10B.1 protein.
Length = 588
Score = 30.7 bits (66), Expect = 0.78
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Frame = +2
Query: 272 KLLFWLKSGGATK--SPLGQLVRKQT-DHRTINKKATTSVIEL*NRKDFGNIFKS--LRE 436
K +FW++ +++ S QL+ D+ T ++ +++ + D + + LRE
Sbjct: 443 KTIFWVRIDNSSEQDSRSKQLIEPMYFDNSTAKIISSRTILSI--EDDLRRMMRKPKLRE 500
Query: 437 LFIS*PKIHSEFVDLIYSCYSGSVPKKHQEIRI 535
+F + P IH F DLI CY+ + H RI
Sbjct: 501 IFKNLPNIHY-FTDLIVKCYNDRYYRYHYSGRI 532
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 29.9 bits (64), Expect = 1.4
Identities = 31/98 (31%), Positives = 44/98 (44%)
Frame = +1
Query: 130 VEVNFDAVRAEFDQNLCFRIDAKKRL*KTFRNKGLFCTFSLRSEIVFKITVLA*IWRGNK 309
VEVN A+R+EF++ L R + + K +K T L SE + +A K
Sbjct: 1573 VEVNMQAMRSEFERQLASREEDEDDRKKGLTSKIRNLTEELESEQRARQAAIA---NKKK 1629
Query: 310 IASWPTSSETN*SPNDKQKSNDLSN*TIKSQGFWKHLQ 423
I S S T + ++ DLS K+Q WK LQ
Sbjct: 1630 IES-QISELTEKNEASLRQIEDLSRQLRKAQLGWKDLQ 1666
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 29.9 bits (64), Expect = 1.4
Identities = 31/98 (31%), Positives = 44/98 (44%)
Frame = +1
Query: 130 VEVNFDAVRAEFDQNLCFRIDAKKRL*KTFRNKGLFCTFSLRSEIVFKITVLA*IWRGNK 309
VEVN A+R+EF++ L R + + K +K T L SE + +A K
Sbjct: 1573 VEVNMQAMRSEFERQLASREEDEDDRKKGLTSKIRNLTEELESEQRARQAAIA---NKKK 1629
Query: 310 IASWPTSSETN*SPNDKQKSNDLSN*TIKSQGFWKHLQ 423
I S S T + ++ DLS K+Q WK LQ
Sbjct: 1630 IES-QISELTEKNEASLRQIEDLSRQLRKAQLGWKDLQ 1666
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 29.9 bits (64), Expect = 1.4
Identities = 31/98 (31%), Positives = 44/98 (44%)
Frame = +1
Query: 130 VEVNFDAVRAEFDQNLCFRIDAKKRL*KTFRNKGLFCTFSLRSEIVFKITVLA*IWRGNK 309
VEVN A+R+EF++ L R + + K +K T L SE + +A K
Sbjct: 1573 VEVNMQAMRSEFERQLASREEDEDDRKKGLTSKIRNLTEELESEQRARQAAIA---NKKK 1629
Query: 310 IASWPTSSETN*SPNDKQKSNDLSN*TIKSQGFWKHLQ 423
I S S T + ++ DLS K+Q WK LQ
Sbjct: 1630 IES-QISELTEKNEASLRQIEDLSRQLRKAQLGWKDLQ 1666
>AY314779-1|AAQ84886.1| 454|Caenorhabditis elegans secretin
receptor-like proteinSEB-3 protein.
Length = 454
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 440 KVHEDF*RCFQNPCDFIVQLLRSLLFCLSFGDQFVSELVGQEAILL 303
KV E++ +C Q C +LR L+ +S FVS ++ AI+L
Sbjct: 91 KVVEEYAQCLQGFCRVCPDVLRDLVISVSLTLSFVSVILLVAAIVL 136
>AL031620-2|CAA20927.2| 454|Caenorhabditis elegans Hypothetical
protein C18B12.2 protein.
Length = 454
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 440 KVHEDF*RCFQNPCDFIVQLLRSLLFCLSFGDQFVSELVGQEAILL 303
KV E++ +C Q C +LR L+ +S FVS ++ AI+L
Sbjct: 91 KVVEEYAQCLQGFCRVCPDVLRDLVISVSLTLSFVSVILLVAAIVL 136
>Z68012-1|CAA92016.1| 304|Caenorhabditis elegans Hypothetical
protein T24D5.1 protein.
Length = 304
Score = 27.9 bits (59), Expect = 5.5
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 358 KQKSNDLSN*TIKSQGFWKHLQKSS*TFHQLT*NSQ*VRRPYIFVLQWISSKETSRNKN 534
+Q DL N + +Q LQ TF N Q R Y F+ Q ++ +T RN+N
Sbjct: 17 QQNFEDLDNSVLSAQS----LQSVVGTFSTKYRNGQKARGSYYFIFQNLAISKTKRNQN 71
>AC006693-10|AAF60376.1| 578|Caenorhabditis elegans Hypothetical
protein W02H5.8 protein.
Length = 578
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 422 KSLRELFIS*PKIHSEFVDLIYSCYSGSVPKKHQEIRI 535
KSL E++ + K+ S L S Y+GS+P K++E +
Sbjct: 170 KSLDEIYETSQKVVSSMGTLGVSLYTGSLPGKNRETEL 207
>Z74039-1|CAA98503.1| 451|Caenorhabditis elegans Hypothetical
protein K03B8.1 protein.
Length = 451
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 272 LNTISLRSENVQNSPLFRKVFY 207
LN I RSEN++ S +F + FY
Sbjct: 9 LNCIKYRSENLEKSKMFYQYFY 30
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,038,556
Number of Sequences: 27780
Number of extensions: 261452
Number of successful extensions: 648
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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