Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0613
         (655 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4YPS9 Cluster: Putative uncharacterized protein; n=1; ...    34   2.6  
UniRef50_Q9EMV9 Cluster: AMV090; n=1; Amsacta moorei entomopoxvi...    33   6.0  
UniRef50_A5IY93 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  
UniRef50_A4KSD6 Cluster: Putative uncharacterized protein; n=8; ...    33   7.9  

>UniRef50_Q4YPS9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 89

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
 Frame = +3

Query: 423 VFYWKTNYFFV---IFYFIIMTYLVPITQSVLSAYYFYK-IMSMFHI 551
           +FY+  +YFF+    FYFI+M Y V     +  A++F + I ++F +
Sbjct: 25  IFYFFFSYFFISSRYFYFIVMFYFVFFAHIIFGAFFFLRNIYNVFQL 71


>UniRef50_Q9EMV9 Cluster: AMV090; n=1; Amsacta moorei entomopoxvirus
           'L'|Rep: AMV090 - Amsacta moorei entomopoxvirus (AmEPV)
          Length = 263

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = -3

Query: 560 RLADVKHRHYFVKVICRKNRLCDRN*ICHNDKIKYYEKIICFPVKHR 420
           +L + +++  FVK I + + L D N I  N+KIK Y KI C  ++++
Sbjct: 132 KLIEDENKKIFVKYITKNDILIDNNTI-DNNKIKKYNKIKCINIENK 177


>UniRef50_A5IY93 Cluster: Putative uncharacterized protein; n=1;
           Mycoplasma agalactiae|Rep: Putative uncharacterized
           protein - Mycoplasma agalactiae
          Length = 253

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +3

Query: 363 IPIVYTP*CIQCCLLQYI*PVFYWKTNYFFVIFYFIIMTYLVPITQSVLSAYYFYK 530
           I ++Y    I  CL  Y+  +  +K+  +FV  +F  +  +V I Q +L  YY+YK
Sbjct: 183 ILMLYVGMLINACLAVYLGTLLPFKSAMWFVCVFFSTLAIVVYIVQIIL--YYYYK 236


>UniRef50_A4KSD6 Cluster: Putative uncharacterized protein; n=8;
           Francisella tularensis|Rep: Putative uncharacterized
           protein - Francisella tularensis subsp. holarctica 257
          Length = 227

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +2

Query: 32  YSFKSSFKVKQEAIIIYNQSVRSMKLVKESSRITIFELIDFATKQRIRYVY 184
           Y   S F +++  I I N+ + + K  ++   ITIF +++F   Q  +YVY
Sbjct: 92  YKEFSDFIIRKPNIDIINEDITNFKTHEKFDIITIFGVMNFFNAQEAKYVY 142


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,574,467
Number of Sequences: 1657284
Number of extensions: 10288275
Number of successful extensions: 26655
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26611
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)