Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0613
         (655 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF522196-1|AAN45861.1|  870|Homo sapiens scavenger receptor type...    32   2.1  
AB052951-1|BAC53753.1|  866|Homo sapiens SRECRP-1 protein.             32   2.1  
AB024433-1|BAD93345.1|  866|Homo sapiens NSR1 protein.                 32   2.1  
BC009326-1|AAH09326.2|  595|Homo sapiens SCARF2 protein protein.       31   2.7  

>AF522196-1|AAN45861.1|  870|Homo sapiens scavenger receptor type F
           protein.
          Length = 870

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
 Frame = -1

Query: 412 YCSKQHCIHYGVYTIGIRAQCSERDGLTPDRVGENRTVDCAWRRVATACVGHAEIGF--- 242
           YC ++ C   G Y +G R +C +  G  P  V E R + C      T C      GF   
Sbjct: 268 YC-REPC-PAGFYGLGCRRRCGQCKGQQPCTVAEGRCLTCEPGWNGTKCDQPCATGFYGE 325

Query: 241 TCGYRC 224
            C +RC
Sbjct: 326 GCSHRC 331


>AB052951-1|BAC53753.1|  866|Homo sapiens SRECRP-1 protein.
          Length = 866

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
 Frame = -1

Query: 412 YCSKQHCIHYGVYTIGIRAQCSERDGLTPDRVGENRTVDCAWRRVATACVGHAEIGF--- 242
           YC ++ C   G Y +G R +C +  G  P  V E R + C      T C      GF   
Sbjct: 268 YC-REPC-PAGFYGLGCRRRCGQCKGQQPCTVAEGRCLTCEPGWNGTKCDQPCATGFYGE 325

Query: 241 TCGYRC 224
            C +RC
Sbjct: 326 GCSHRC 331


>AB024433-1|BAD93345.1|  866|Homo sapiens NSR1 protein.
          Length = 866

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
 Frame = -1

Query: 412 YCSKQHCIHYGVYTIGIRAQCSERDGLTPDRVGENRTVDCAWRRVATACVGHAEIGF--- 242
           YC ++ C   G Y +G R +C +  G  P  V E R + C      T C      GF   
Sbjct: 268 YC-REPC-PAGFYGLGCRRRCGQCKGQQPCTVAEGRCLTCEPGWNGTKCDQPCATGFYGE 325

Query: 241 TCGYRC 224
            C +RC
Sbjct: 326 GCSHRC 331


>BC009326-1|AAH09326.2|  595|Homo sapiens SCARF2 protein protein.
          Length = 595

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
 Frame = -1

Query: 382 GVYTIGIRAQCSERDGLTPDRVGENRTVDCAWRRVATACVGHAEIGF---TCGYRC 224
           G Y +G R +C +  G  P  V E R + C      T C      GF    C +RC
Sbjct: 5   GFYGLGCRRRCGQCKGQQPCTVAEGRCLTCEPGWNGTKCDQPCATGFYGEGCSHRC 60


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,036,757
Number of Sequences: 237096
Number of extensions: 1460346
Number of successful extensions: 6094
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6093
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)