Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0613
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75527-8|CAA99778.2|  316|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z83319-2|CAB05904.2|  433|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z75712-10|CAB00039.2|  332|Caenorhabditis elegans Hypothetical p...    28   6.7  
AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA ...    28   6.7  
Z49913-2|CAA90143.1|  660|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AC006617-12|AAF39774.1|  324|Caenorhabditis elegans Serpentine r...    27   8.8  

>Z75527-8|CAA99778.2|  316|Caenorhabditis elegans Hypothetical
           protein C15C8.6 protein.
          Length = 316

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +3

Query: 432 WKTNYFFVI-FYFIIMTYLVPITQSVLSAYYFYKIMSMFHICQASRDG 572
           WK  YF VI F +++   +VP T   L A  F     +F     S DG
Sbjct: 169 WKLQYFEVISFIYLVAFIIVPTTLFSLIALSFLIYKKLFQKPHTSEDG 216


>Z83319-2|CAB05904.2|  433|Caenorhabditis elegans Hypothetical
           protein T02D1.6 protein.
          Length = 433

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +3

Query: 420 PVFYWKTNYFFVIFYFIIMTYLVPITQSVLSAYYFYK 530
           P+FYW T+  F++ Y + +  +V     +++  Y +K
Sbjct: 238 PIFYWFTSTTFILGYVVPLILIVYFNLKLINKLYAHK 274


>Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical
           protein VZK822L.1 protein.
          Length = 339

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +3

Query: 375 YTP*CIQCC-LLQYI*PVFYWKTNYFFVIFY 464
           Y P  I CC +L  I PV++WK    F+ FY
Sbjct: 195 YFPLVILCCFILPTIIPVYFWKET-AFIAFY 224


>Z75712-10|CAB00039.2|  332|Caenorhabditis elegans Hypothetical
           protein K04G2.2 protein.
          Length = 332

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 41  KSSFKVKQEAIIIYNQSVRSMKLVKESSRITIFELI 148
           KS F V +E II+Y QS+ ++  V  +SR  +  L+
Sbjct: 175 KSEFGVPKEKIILYGQSIGTVPSVDLASREDLAALV 210


>AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-6 protein.
          Length = 339

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +3

Query: 375 YTP*CIQCC-LLQYI*PVFYWKTNYFFVIFY 464
           Y P  I CC +L  I PV++WK    F+ FY
Sbjct: 195 YFPLVILCCFILPTIIPVYFWKET-AFIAFY 224


>Z49913-2|CAA90143.1|  660|Caenorhabditis elegans Hypothetical
           protein ZK938.3 protein.
          Length = 660

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = -1

Query: 313 ENRTVDCAWRRVATACVGHAEIGFTCGYRCFTSKKYFFKKFLKINVSYSL 164
           E+  +   WR ++ A +GH E        C   +K F + FLK    + +
Sbjct: 190 EDVAITSTWRMISQAAIGHHEHHLEVKRAC-QEQKAFRESFLKTQTDFDI 238


>AC006617-12|AAF39774.1|  324|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 67 protein.
          Length = 324

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = +3

Query: 411 YI*PVFYWKTNYFFVIFYFIIMTYLVPITQSVLSAYYFYKIMSMFHICQA 560
           Y  PVF+   +  F+I +F+I  +  P+ + +    Y    + M  I  A
Sbjct: 10  YYWPVFFMSCSSLFLIMFFLIHNFTTPLLKPLRFFLYPANAVMMISITMA 59


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,245,955
Number of Sequences: 27780
Number of extensions: 266020
Number of successful extensions: 811
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)